1887

Abstract

A database of the fatty acid profiles of the genus containing the profiles of more than 1,200 authentic xanthomonad strains (P. Yang, L. Vauterin, M. Vancanneyt, J. Swings, and K. Kersters, Syst. Appl. Microbiol. 16:47–71, 1993) was reevaluated to provide data for descriptions and rapid identification of new species. A total of 1,061 strains in the fatty acid database were grouped into the new species described in the classification of Vauterin et al. (L. Vauterin, B. Hoste, K. Kersters, and J. Swings, Int. J. Syst. Bacteriol. 45:472–489, 1995), and the average fatty acid profiles of the species were determined to obtain a representative fatty acid profile for each species. Within each species, the relative variation in each fatty acid was calculated to determine the potential of fatty acid data for discriminating between species. The fatty acid content of each species and the relative variation in each fatty acid provide additional data for species descriptions. With the exception of in particular and , and to lesser extents, most species produce characteristic fatty acid profiles that can be used to differentiate them from other species.

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/00207713-46-1-298
1996-01-01
2024-04-20
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/46/1/ijs-46-1-298.html?itemId=/content/journal/ijsem/10.1099/00207713-46-1-298&mimeType=html&fmt=ahah

References

  1. Abel K., De Schmertzing H., Peterson J. L,. 1963; Classification of microorganisms by analysis of chemical composition. J. Bacteriol 85:1039–1044
    [Google Scholar]
  2. Collins M. D., Goodfellow M., Minnikin D. E. 1982; A survey of the structures of mycolic acids in Coiynebacterium and related taxa. J. Gen. Microbiol 128:129–149
    [Google Scholar]
  3. Collins M. D., Goodfellow M., Minnikin D. E. 1982; Fatty acid composition of some mycolic acid-containing coryneform and related bacteria. J. Gen. Microbiol 128:2503–2509
    [Google Scholar]
  4. Collins M. D., Goodfellow M., Minnikin D. E. 1982; Polar lipid composition in the classification of Arthrobacter and Microbacterium. FEMS Microbiol. Lett 15:299–302
    [Google Scholar]
  5. De Boer S. H., Sasser M. 1986; Differentiation of Erwinia carotovora spp. carotovora and E. carotovora spp. atroseptica on the basis of cellular fatty acid composition. Can. J. Microbiol 32:796–800
    [Google Scholar]
  6. Gitaitis R. D., Beaver R. W,. 1990; Characterization of fatty acid methyl ester content of Clavibacter michiganensis subsp. michiganensls. Phytopathology 80:318–321
    [Google Scholar]
  7. Graham J. H., Hartung J. S., Stall R. E., Chase A. R. 1990; Pathological, restriction-fragment length polymorphism, and fatty acid profile relationships between Xanthomonas campestris from citrus and noncitrus hosts. Phytopathology 80:829–836
    [Google Scholar]
  8. Hartung J. S., Civerolo E. L. 1987; Genomic fingerprints of Xanthomonas campestris pv. citri strains from Asia, South America, and Florida. Phytopathology 77:282–285
    [Google Scholar]
  9. Henningson P. J., Gudmestad N. C. 1991; Fatty acid analysis of phytopathogenic coryneform bacteria. J. Gen. Microbiol 137:427–440
    [Google Scholar]
  10. Janse J. D. 1991; Pathovar discrimination within Pseudomonas syringae subsp. savastanoi using whole cell fatty acids and pathogenicity as criteria. Syst. Appl. Microbiol 14:79–84
    [Google Scholar]
  11. Janse J. D. 1991; Infraand intraspecific classification of Pseudomonas solanacearum strains, using whole cell fatty acids analysis. Syst, Appl. Microbiol 14:335–345
    [Google Scholar]
  12. Korn-Wendisch F., Kempf A., Grund E., Kroppenstedt R. M., Kutzner H. J. 1989; Transfer of Faenia rectivirgula Kurup and Agre 1983 to the genus Saccharopolyspora Lacey and Goodfellow 1975, elevation of Saccharopolyspora hirsuta subsp. taberi Labeda 1987 to species level, and emended description of the genus Saccharopolyspora. Int. J. Syst. Bacteriol 39:430–441
    [Google Scholar]
  13. Miller L. T. 1982; Single derivatization method for routine analysis of bacterial whole-cell fatty acid methyl esters, including hydroxy acids. J. Clin. Microbiol 16:584–586
    [Google Scholar]
  14. Roy M. A. 1988; Use of fatty acids for the identification of phytopathogenic bacteria. Plant Dis 72:460
    [Google Scholar]
  15. Sasser J. M., Fieldhouse D. J., Carter C. N. 1984; Computer assisted identification of bacteria based on fatty acid analysis. Phytopathology 74:882
    [Google Scholar]
  16. Stead D. E. 1989; Grouping al Xanthomonas campestris pathovars of cereals and grasses by fatty acid profiling. Bull. OEPP (Organ. Eur. Mediterr. Prot. Plant.)/EPPO (Eur. Mediterr. Plant. Prot. Organ.) Bull 19:57–68
    [Google Scholar]
  17. Stead D. E. 1992; Grouping of plant-pathogenic and some other Pseudomonas spp. by using cellular fatty acid profiles. Int. J. Syst. Bacteriol 42:281–295
    [Google Scholar]
  18. Stead D. E., Sellwood J. E., Wilson J., Vieny I. 1992; Evaluation of a commercial microbial identification system based on fatty acid profiles for rapid, accurate identification of plant pathogenic bacteria. J. Appl. Microbiol 72:315–321
    [Google Scholar]
  19. Suzuki K., Goodfellow M., Donnell A. G. O. 1993 Ceil envelopes and classification. 195–250 Goodfellow M., O’Donnell A. G.ed Handbook of new bacterial systematics Academic Press; London:
    [Google Scholar]
  20. Vauterin L., Hoste B., Kersters K., Swings J. 1995; Reclassification of Xanthomonas. Int. J. Syst. Bacteriol 45:472–489
    [Google Scholar]
  21. Vauterin L., Swings J., Kersters K. 1991; Grouping of Xanthomonas campestris pathovars by SDS-PAGE of proteins. J. Gen. Microbiol 137:1677–1687
    [Google Scholar]
  22. Vauterin L., Swings J., Kersters K., Gillis M,, Mew T. W., Schroth M. N., Palleroni N. J., Hildebrand D. C., Stead D. E., Civerolo E. L., Hayward A. C., Maraite H., Stall R. E., yidaver A. K., Bradbury J. F. 1990; Towards an improved taxonomy of Xanthomonas. Int. J. Syst. Bacteriol 40:312–316
    [Google Scholar]
  23. Vauterin L., Yang P., Hoste B., Pot B., Swings J., Kersters K. 1992; Taxonomy of xanthomonads from cereals and grasses based on SDS-PAGE of proteins, fatty acid analysis and DNA hybridization. J. Gen. Microbiol 138:1467–1477
    [Google Scholar]
  24. Vauterin L., Yang P., Hoste B., Vancanneyt M., Civerolo E. L., Swings J., Kersters K. 1991; Differentiation of Xanthomonas campestris pv. citri strains by sodium dodecyl sulfate-polyacrylamide gel electrophoresis of proteins, fatty acid analysis, and DNA hybridization. Int. J. Syst. Bacteriol 41:535–542
    [Google Scholar]
  25. Welch D. F. 1991; Application of cellular fatty acid analysis. Clin. Microbiol. Rev 4:422–438
    [Google Scholar]
  26. Yang P., Vauterin L., Vancanneyt M., Swings J., Kersters K. 1993; Application of fatty acid methyl esters for the taxonomic analysis of the genus Xanthomonas. Syst. Appl. Microbiol 16:47–71
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/00207713-46-1-298
Loading
/content/journal/ijsem/10.1099/00207713-46-1-298
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error