1887

Abstract

In order to determine the phylogenetic structure of the actinomycete family , the 16S ribosomal DNA sequences of 17 type species of the genera , and were compared with the 16S ribosomal DNA sequences of species of the genera , and and with those of species of the genus and other actinomycete genera for which the sequences have been previously determined. All genera of the family, together with the genera , and , form a phylogenetically coherent cluster that is well separated from other families of the order . Except for one species of the genus , all species cluster according to their genus affiliation. The inclusion of the genera , and into the family broadens the phenotypic and chemotaxonomic heterogeneity of this taxon. An emendation of the family is given.

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1996-07-01
2024-03-29
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References

  1. Asano K., Kawamoto L. 1986; Catellatospora, a new genus of the Actinomycetales. Int. J. Sy st. Bacteriol 36:512–517
    [Google Scholar]
  2. De Soete G. 1983; A (east squares algorithm for fitting additive trees to proximity data. Psychometrika 48:621–626
    [Google Scholar]
  3. Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH 1993 Catalogue of strains, 5th. Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH; Braunschweig, Germany:
    [Google Scholar]
  4. Embley T. M., Stackebrandt E. 1994; The molecular phylogeny and systematics of the actinomycetes. Annu. Rev. Microbiol 48:257–289
    [Google Scholar]
  5. Felsenstein J. 1993 Phylip (phylogeny inference package), version 3.5c University of Washington; Seattle:
    [Google Scholar]
  6. Goodfellow M., Stanton L. J., Simpson K. E., Minnikin D. E. 1990; Numerical and chemical classification of Actinoplanes and some related actinomycetes. J. Gen. Microbiol 136:19–36
    [Google Scholar]
  7. Horan A. C., Brodsky B. 1986; Actinoplanes caeruleus sp. nov., a bluepigmented species of the genus Actinoplanes. Int. J. Syst. Bacteriol 35:187–191
    [Google Scholar]
  8. Jukes T. H., Cantor C. R. 1969 Evolution of protein molecules. 21–132 Munro H. N.ed Mammalian protein metabolism Academic Press; New York:
    [Google Scholar]
  9. Koch C., Kroppenstedt R. M., Stackebrandt E. 1996; Intrageneric relationships of the actinomycete genus Micromonospora. Int. J. Syst. Bacteriol 46:383–387
    [Google Scholar]
  10. Kothe H.-W. 1987; Die Gattungen Actinoplanes und ihre Stellung innerhalb der Actinomycetales. Ph.D. thesis University Marburg; Marburg, Germany:
    [Google Scholar]
  11. KrasiFnikov N. A. 1938 Ray fungi and related organisvas-Actinomycetales. Akad. Nauk SSSR; Moscow:
    [Google Scholar]
  12. Kroppenstedt R. M. 1987; Chemische Untersuchungen an Actinomycetales und verwandten Taxa, Korrelation von Chemosystematik und Phylogenie. Habilitation thesis Technical University Darmstadt; Darmstadt, Germany:
    [Google Scholar]
  13. Maidak B. L., Larsen N., McCaughey M. J., Overbeck R., Olsen G. J., Fogel K., Blandy J., Woese C. R. 1994; The ribosomal database project. Nucleic Acids Res 22:3483–3487
    [Google Scholar]
  14. Pitulle C., Dorsch M., Kazda J., Wolters J., Stackebrandt E. 1992; Phylogeny of the rapidly growing members of the genus Mycobacterium. Int. J. Syst. Bacteriol 42:337–343
    [Google Scholar]
  15. Rainey F. A. Unpublished data
  16. Rainey F. A., Burghardt J., Kroppenstedt R. M., Klatte S., Stackebrandt E. 1995; Phylogenetic analysis of the genera Rhodococcus and Nocardia and evidence for the evolutionary origin of the genus Nocardia from within the radiation of Rhodococcus species. Microbiology 141:523–528
    [Google Scholar]
  17. Rainey F. A., Dorsch M., Morgan H. W., Stackebrandt E. 1992; 16S rDNA analysis of Spirochaeta thermophila,, its phylogenetic position and implications for the systematics of the order Spirochaetales. Syst. Appl. Microbiol 15:197–202
    [Google Scholar]
  18. Rainey F. A., Weiss N., Stackebrandt E. 1995; Phylogenetic analysis of the genera Cellulomonas, Promicromonospora, and Jonesia and proposal to exclude the genus Jonesia from the family Cellulomonadaceae. Int. J. Syst. Bacteriol 45:649–652
    [Google Scholar]
  19. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol 4:406–425
    [Google Scholar]
  20. Stackebrandt E., Ludwig W., Seewaldt E., Schleifer K.-H. 1983; Phylogeny of sporeforming members of the order Actinomycetales. Int. J. Syst. Bacteriol 33:173–180
    [Google Scholar]
  21. Stackebrandt E., Woese C. R. 1981; Towards a phylogeny of actinomycetes and related organisms. Curr. Microbiol 5:131–136
    [Google Scholar]
  22. Tamura T., Nakagaito Y., Nishii T., Hasegawa T., Stackebrandt E., Yokota A. 1994; A new genus of the order Actinomycetales, Couchioplanes gen. nov., with descriptions of Couchioplanes caeruleus (Horan and Brodsky 1986) comb, nov. and Couchioplanes caeruleus subsp. azureus subsp. nov. Int. J. Syst. Bacteriol 44:193–203
    [Google Scholar]
  23. Tamura T., Yokota A., Huang L. H., Hasegawa T., Hatano K. 1995; Five new species of the genus Catenuloplanes: Catenuloplanes niger sp. nov., Catenuloplanes indicus sp. nov., Catenuloplanes atrovinosus sp. nov., Catenuloplanes castaneus sp. nov., and Catenuloplanes nepalensis sp. nov. Int. J. Syst. Bacteriol 45:858–860
    [Google Scholar]
  24. Vobis G. 1991 The genus Actinoplanes and related genera. 1029–1060 Balows A., Triiper H. G., Dworkin M., Harder W., Schleifer K.-H.ed The prokaryotes, 2nd. Springer; New York:
    [Google Scholar]
  25. Ward-Rainey N., Rainey F. A., Stackebrandt E. 1996; The phylogenetic structure of the genus Streptosporangium. Syst. Appl. Microbiol 19:50–55
    [Google Scholar]
  26. Warwick S., Bowen T., McVeigh H., Embley T. M. 1994; A phylogenetic analysis of the family Pseudonocardiaceae and the genera Actinokineospora and Saccharothrix with 16S rRNA sequences and a proposal to combine the genera Amycolata and Pseudonocardia in an emended genus Pseudonocardia. Int. J. Syst. Bacteriol 44:293–299
    [Google Scholar]
  27. Yokota A., Tamura T., Hasegawa T., Huang L. H. 1993; A new genus of the order Actinomycetales: Catenuloplanes japonicus gen. nov., sp. nov. Int. J. Syst. Bacteriol 43:805–812
    [Google Scholar]
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