Reclassification of Deinococcus xibeiensis Wang et al. 2010 as a heterotypic synonym of Deinococcus wulumuqiensis Wang et al. 2010

References

1. Auch A. F., von Jan M., Klenk H. P., Göker M. ( 2010 ). Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison. . Stand Genomic Sci 2, 117–134. [View Article] [PubMed]
   [Google Scholar]
2. Felsenstein J. ( 1985 ). Confidence limits on phylogenies: an approach using the bootstrap. . Evolution 39, 783–791. [View Article]
   [Google Scholar]
3. Felsenstein J. ( 1993 ). phylip (phylogenetic inference package) version 3.5c. Distributed by the author. . Department of Genome Sciences, University of Washington;, Seattle, USA:.
   [Google Scholar]
4. Goris J., Konstantinidis K. T., Klappenbach J. A., Coenye T., Vandamme P., Tiedje J. M. ( 2007 ). DNA-DNA hybridization values and their relationship to whole-genome sequence similarities. . Int J Syst Evol Microbiol 57, 81–91. [View Article] [PubMed]
   [Google Scholar]
5. Hu Y., Xu X., Song P., Jiang L., Zhang Z., Huang H. ( 2013 ). Draft genome sequence of Deinococcus xibeiensis R13, a new carotenoid-producing strain. . Genome Announc 1, e00987-13. [View Article] [PubMed]
   [Google Scholar]
6. Jeon Y. S., Lee K., Park S. C., Kim B. S., Cho Y. J., Ha S. M., Chun J. ( 2014 ). EzEditor: a versatile sequence alignment editor for both rRNA- and protein-coding genes. . Int J Syst Evol Microbiol 64, 689–691. [View Article] [PubMed]
   [Google Scholar]
7. Jukes T. H., Cantor C. R. ( 1969 ). Evolution of protein molecules. . In Mammalian Protein Metabolism, vol. 3, pp. 21–132. Edited by Munro H. N. . New York:: Academic Press;. [View Article]
   [Google Scholar]
8. Kim M., Oh H. S., Park S. C., Chun J. ( 2014 ). Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. . Int J Syst Evol Microbiol 64, 346–351. [View Article] [PubMed]
   [Google Scholar]
9. Konstantinidis K. T., Tiedje J. M. ( 2005 ). Genomic insights that advance the species definition for prokaryotes. . Proc Natl Acad Sci U S A 102, 2567–2572. [View Article] [PubMed]
   [Google Scholar]
10. Lapage S. P., Sneath P. H. A., Lessel E. F., Skerman V. B. D., Seeliger H. P. R., Clark W. A. (editors) ( 1992 ). International Code of Nomenclature of Bacteria (1990 Revision). Bacteriological Code. Washington, DC:: American Society for Microbiology;.
    [Google Scholar]
11. Mellmann A., Cloud J., Maier T., Keckevoet U., Ramminger I., Iwen P., Dunn J., Hall G., Wilson D. et al. ( 2008 ). Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria. . J Clin Microbiol 46, 1946–1954. [View Article] [PubMed]
    [Google Scholar]
12. Parte A. ( 2014 ). List of prokaryotic names with standing in nomenclature. . http://www.bacterio.net
13. Richter M., Rosselló-Móra R. ( 2009 ). Shifting the genomic gold standard for the prokaryotic species definition. . Proc Natl Acad Sci U S A 106, 19126–19131. [View Article] [PubMed]
    [Google Scholar]
14. Saitou N., Nei M. ( 1987 ). The neighbor-joining method: a new method for reconstructing phylogenetic trees. . Mol Biol Evol 4, 406–425.[PubMed]
    [Google Scholar]
15. Sohpal V. K., Dey A., Singh A. ( 2010 ). mega biocentric software for sequence and phylogenetic analysis: a review. . Int J Bioinform Res Appl 6, 230–240. [View Article] [PubMed]
    [Google Scholar]
16. Wang W., Mao J., Zhang Z., Tang Q., Xie Y., Zhu J., Zhang L., Liu Z., Shi Y., Goodfellow M. ( 2010 ). Deinococcus wulumuqiensis sp. nov., and Deinococcus xibeiensis sp. nov., isolated from radiation-polluted soil. . Int J Syst Evol Microbiol 60, 2006–2010. [View Article] [PubMed]
    [Google Scholar]
17. Xu X., Jiang L., Zhang Z., Shi Y., Huang H. ( 2013 ). Genome sequence of a gamma- and UV-ray-resistant strain, Deinococcus wulumuqiensis R12. . Genome Announc 1, e-00206-13. [View Article] [PubMed]
    [Google Scholar]