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Volume 61, Issue 5

sp. nov., isolated from peat swamp forest soil Free

Abstract

A novel actinomycete, strain P0402, was isolated from peat swamp forest soil collected in Thailand. Its taxonomic position was determined by using a polyphasic taxonomic approach. The chemotaxonomic characteristics of this strain matched those of the genus , i.e. the presence of -diaminopimelic acid and glycolyl muramic acid in the peptidoglycan, whole-cell sugar pattern D, phospholipid type II, and cellular fatty acid type 3b. Phylogenetic analysis based on 16S rRNA gene sequences revealed a close relationship between strain P0402 and JCM 13248 (99.0 % similarity), JCM 12345 (99.0 %), JCM 12870 (98.9 %), JCM 3125 (98.7 %), JCM 3031 (98.7 %), JCM 3156 (98.6 %) and JCM 10878 (98.5 %). It could be clearly distinguished from these type strains based on low levels of DNA–DNA relatedness and phenotypic differences. On the basis of the data presented, strain P0402 is suggested to represent a novel species of the genus , for which the name sp. nov. is proposed. The type strain is P0402 ( = JCM 15292  = PCU 315  = TISTR 1883).

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Funding
This study was supported by the:
  • Thailand Research Fund
  • Faculty of Pharmaceutical Sciences Research Fund (2006), Chulalongkorn University, Bangkok, Thailand
© 2011 IUMS
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2011-05-01
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Micromonospora humi sp. nov., isolated from peat swamp forest soil
Int J Syst Evol Microbiol 61, 1176 (2011); https://doi.org/10.1099/ijs.0.024281-0
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