Lactobacillus nasuensis sp. nov., a lactic acid bacterium isolated from silage, and emended description of the genus Lactobacillus

References

1. Beijerinck M. W. 1901; Sur les ferments lactiques de l’industrie. Arch Neerl Sci Exactes Nat 6:212–243 (in French)
   [Google Scholar]
2. Ben-Dov E., Shapiro O. H., Siboni N., Kushmaro A. 2006; Advantage of using inosine at the 3′ termini of 16S rRNA gene universal primers for the study of microbial diversity. Appl Environ Microbiol 72:6902–6906 [View Article][PubMed]
   [Google Scholar]
3. Cai Y. 1999; Identification and characterization of Enterococcus species isolated from forage crops and their influence on silage fermentation. J Dairy Sci 82:2466–2471 [View Article][PubMed]
   [Google Scholar]
4. Cai Y., Benno Y., Ogawa M., Ohmomo S., Kumai S., Nakase T. 1998; Influence of Lactobacillus spp. from an inoculant and of Weissella and Leuconostoc spp. from forage crops on silage fermentation. Appl Environ Microbiol 64:2982–2987[PubMed]
   [Google Scholar]
5. Cai Y., Yang J., Pang H., Kitahara M. 2011; Lactococcus fujiensis sp. nov., a lactic acid bacterium isolated from vegetable matter. Int J Syst Evol Microbiol 61:1590–1594 [View Article][PubMed]
   [Google Scholar]
6. Ennahar S., Cai Y., Fujita Y. 2003; Phylogenetic diversity of lactic acid bacteria associated with paddy rice silage as determined by 16S ribosomal DNA analysis. Appl Environ Microbiol 69:444–451 [View Article][PubMed]
   [Google Scholar]
7. Ezaki T., Hashimoto Y., Yabuuchi E. 1989; Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224–229 [View Article]
   [Google Scholar]
8. Kandler O., Weiss N. 1986; Genus Lactobacillus Beijerinck 1901^AL . In Bergey’s Manual of Systematic Bacteriology vol. 2 pp. 1209–1234 Edited by Sneath P. H., Mair N., Sharpe M. E., Holt J. G. Baltimore: William & Wilkins;
   [Google Scholar]
9. Kimura M., Ota T. 1972; On the stochastic model for estimation of mutational distance between homologous proteins. J Mol Evol 2:87–90 [View Article][PubMed]
   [Google Scholar]
10. Kozaki M., Uchimura T., Okada S. 1992; [Experimental Manual for Lactic Acid Bacteria]. pp. 29–72 Tokyo: Asakurasyouten; (in Japanese)
    [Google Scholar]
11. Liu B., Dong X. 2002; Lactobacillus pantheris sp. nov., isolated from faeces of a jaguar. Int J Syst Evol Microbiol 52:1745–1748 [View Article][PubMed]
    [Google Scholar]
12. Moon N. J. 1984; A short view of the role of lactobacilli in silage fermentation. Food Microbiol 1:333–338 [View Article]
    [Google Scholar]
13. Pang H., Qin G., Tan Z., Li Z., Wang Y., Cai Y. 2011; Natural populations of lactic acid bacteria associated with silage fermentation as determined by phenotype, 16S ribosomal RNA and recA gene analysis. Syst Appl Microbiol 34:235–241 [View Article][PubMed]
    [Google Scholar]
14. Rzhetsky A., Nei M. 1993; Theoretical foundation of the minimum-evolution method of phylogenetic inference. Mol Biol Evol 10:1073–1095[PubMed]
    [Google Scholar]
15. Saito H., Miura K. I. 1963; Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72:619–629 [View Article][PubMed]
    [Google Scholar]
16. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425[PubMed]
    [Google Scholar]
17. Sanger F., Nicklen S., Coulson A. R. 1977; DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A 74:5463–5467 [View Article][PubMed]
    [Google Scholar]
18. Spicher G., Schröder R. 1978; [The microflora of sour dough. IV. Communication: bacterial composition of sourdough starters genus Lactobacillus Beijerinck (author’s transl)]. Z Lebensm Unters Forsch 167:342–354 (in German) [View Article][PubMed]
    [Google Scholar]
19. Spicher G., Schröder R. 1980; [The microflora of sourdough. IX. Communication: comparative investigations over the performance of lactic acid bacteria (genus Lactobacillus Beijerinck) occurring in starter cultures (‘Reinzuchtsauer’)]. Z Lebensm Unters Forsch 170:262–266 (in German) [View Article]
    [Google Scholar]
20. Tamaoka J., Komagata K. 1984; Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25:125–128 [View Article]
    [Google Scholar]
21. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. 2011; mega5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739 [View Article][PubMed]
    [Google Scholar]
22. Tannock G. W. 1999; A fresh look at the intestinal microflora. In Probiotics: A Critical Review pp. 1–15 Edited by Tannock G. W. Wymondham: Horizon Scientific Press;
    [Google Scholar]