Glaciecola polaris sp. nov., a novel budding and prosthecate bacterium from the Arctic Ocean, and emended description of the genus Glaciecola

References

1. Bowman J. P., McCammon S. A., Brown J. L., McMeekin T. A. 1998; Glaciecola punicea gen. nov., sp. nov. and Glaciecola pallidula gen. nov., sp. nov. psychrophilic bacteria from Antarctic sea-ice habitats. Int J Syst Bacteriol 48:1213–1222 [CrossRef]
   [Google Scholar]
2. Coenye T., Falsen E., Vancanneyt M., Hoste B., Govan J. R., Kersters K., Vandamme P. 1999; Classification of Alcaligenes faecalis -like isolates from the environment and human clinical samples as Ralstonia gilardii sp. nov. Int J Syst Bacteriol 49:405–413 [CrossRef]
   [Google Scholar]
3. Ezaki T., Hashimoto Y., Yabuuchi E. 1989; Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224–229 [CrossRef]
   [Google Scholar]
4. Ivanova E. P., Zhukova N. V., Svetashev V. I., Gorshkova N. M., Kurilenko V. V., Frolova G. M., Mikhailov V. V. 2000; Evaluation of phospholipid and fatty acid compositions as chemotaxonomic markers of Alteromonas -like proteobacteria. Curr Microbiol 41:341–345 [CrossRef]
   [Google Scholar]
5. Jukes T. H., Cantor C. R. 1969; Evolution of protein molecules. In Mammalian Protein Metabolism pp  21–132 Edited by Munro H. N. New York: Academic Press;
   [Google Scholar]
6. Labrenz M., Collins M. D., Lawson P. A., Tindall B. J., Braker G., Hirsch P. 1998; Antarctobacter heliothermus gen. nov., sp. nov., a budding bacterium from hypersaline and heliothermal Ekho Lake. Int J Syst Bacteriol 48:1363–1372 [CrossRef]
   [Google Scholar]
7. Labrenz M., Collins M. D., Lawson P. A., Tindall B. J., Schumann P., Hirsch P. 1999; Roseovarius tolerans gen. nov., sp. nov., a budding bacterium with variable bacteriochlorophyll a production from hypersaline Ekho Lake. Int J Syst Bacteriol 49:137–147 [CrossRef]
   [Google Scholar]
8. Mergaert J., Verhelst A., Cnockaert M. C., Tan T.-L., Swings J. 2001; Characterization of facultative oligotrophic bacteria from polar seas by analysis of their fatty acids and 16S rDNA sequences. Syst Appl Microbiol 24:98–107 [CrossRef]
   [Google Scholar]
9. Mikhailov V. V., Romanenko L. A., Ivanova E. P. 2002; The genus Alteromonas and related Proteobacteria. In The Prokaryotes: an Evolving Electronic Resource for the Microbiological Community Edited by Dworkin M., Rosenberg E., Schleifer K. H., Stackebrandt E. New York: Springer;
   [Google Scholar]
10. Pitcher D. G., Saunders N. A., Owen R. J. 1989; Rapid extraction of bacterial genomic DNA with guanidinium thiocyanate. Lett Appl Microbiol 8:151–156 [CrossRef]
    [Google Scholar]
11. Rademaker J. L. W., de Bruijn F. J. 1997; Characterization and classification of microbes by rep-PCR genomic fingerprinting and computer assisted pattern analysis. In DNA Markers: Protocols Applications and Overviews pp  151–171 Edited by Caetano-Anollés G., Gresshoff P. M. New York: Wiley;
    [Google Scholar]
12. Rademaker J. L. W., Hoste B., Louws F. J., Kersters K., Swings J., Vauterin L., Vauterin P., de Bruijn F. J. 2000; Comparison of AFLP and rep-PCR genomic fingerprinting with DNA–DNA homology studies: Xanthomonas as a model system. Int J Syst Evol Microbiol 50:665–677 [CrossRef]
    [Google Scholar]
13. Reichenbach H., Dworkin M. 1981; Introduction to the gliding bacteria. In The Prokaryotes vol 1 pp  315–327 Edited by Starr M. P., Stolp H., Trüper H. G., Balows A., Schlegel H. G. Berlin: Springer;
    [Google Scholar]
14. Romanenko L. A., Zhukova N. V., Rohde M., Lysenko A. M., Mikhailov V. V., Stackebrandt E. 2003; Glaciecola mesophila sp. nov., a novel marine agar-digesting bacterium. Int J Syst Evol Microbiol 53:647–651 [CrossRef]
    [Google Scholar]
15. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
16. Smibert R. M., Krieg N. R. 1994; Phenotypic characterization. In Methods for General and Molecular Microbiology pp  611–654 Edited by Gerhardt P., Murray R. G. E., Wood W. A., Krieg N. R. Washington, DC: American Society for Microbiology;
    [Google Scholar]
17. Tan T. L. 1986; Construction and use of a dialysis chamber for investigating in situ the toxicity of heavy metals on bacteria. IFREMER Actes Colloq 3:589–595
    [Google Scholar]
18. Tan T. L. 1997; Biolog metabolic fingerprints for clustering marine oligotrophic bacteria from polar regions. In Microbial Communities – Functional versus Structural Approaches pp  161–170 Edited by Insam H., Rangger A. Berlin: Springer;
    [Google Scholar]
19. Tan T. L., Rüger H. J. 1991; Biomass and nutritional requirements of psychrotrophic bacterial communities in Fram Strait and Western Greenland Sea. Kiel Meeresforsch Sonderh 8:219–224
    [Google Scholar]
20. Tan T. L., Rüger H. J. 1999; Enrichment, isolation, and Biolog metabolic fingerprints of oligotrophic bacteria from the Antarctic Ocean. Arch Hydrobiol Spec Issues Adv Limnol 54:255–272
    [Google Scholar]
21. Van de Peer Y., De Wachter R. 1994; treecon for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput Appl Biosci 10:569–570
    [Google Scholar]
22. van Gemerden H., Kuenen J. G. 1984; Strategies for growth and evolution of microorganisms in oligotrophic habitats. In Heterotrophic Activity in the Sea (Nato Conference Series IV. Marine Sciences) vol 15 pp  25–54 Edited by Hobbie J. E., Williams P. J. New York: Plenum;
    [Google Scholar]
23. Van Trappen S., Mergaert J., Swings J. 2003; Flavobacterium gelidilacus sp. nov., isolated from microbial mats in Antarctic lakes. Int J Syst Evol Microbiol 53:1241–1245 [CrossRef]
    [Google Scholar]
24. Van Trappen S., Vandecandelaere I., Mergaert J., Swings J. 2004a; Flavobacterium degerlachei sp. nov., Flavobacterium frigoris sp. nov. and Flavobacterium micromati sp. nov. novel psychrophilic bacteria isolated from microbial mats in Antarctic lakes. Int J Syst Evol Microbiol 54:85–92 [CrossRef]
    [Google Scholar]
25. Van Trappen S., Tan T.-L., Yang J., Mergaert J., Swings J. 2004b; Alteromonas stellipolaris sp. nov., a novel, budding, prosthecate bacterium from Antarctic seas, and emended description of the genus Alteromonas . Int J Syst Evol Microbiol 54:1157–1163 [CrossRef]
    [Google Scholar]
26. Versalovic J., Koeuth T., Lupski J. R. 1991; Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting in bacterial genomes. Nucleic Acids Res 19:6823–6831 [CrossRef]
    [Google Scholar]
27. Versalovic J., Schneider M., de Bruijn F. J., Lupski J. R. 1994; Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction. Methods Mol Cell Biol 5:25–40
    [Google Scholar]
28. Wayne L. G., Brenner D. J., Colwell R. R. 9 other authors 1987; International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37:463–464 [CrossRef]
    [Google Scholar]
29. Weiner R. M., Melick M., O'Neill K., Quintero E. 2000; Hyphomonas adhaerens sp. nov., Hyphomonas johnsonii sp. nov. and Hyphomonas rosenbergii sp. nov., marine budding and prosthecate bacteria. Int J Syst Evol Microbiol 50:459–469 [CrossRef]
    [Google Scholar]
30. West P. A., Colwell R. R. 1984; Identification and classification of the Vibrionaceae – an overview. In Vibrios in the Environment pp  285–363 Edited by Colwell R. R. New York: Wiley;
    [Google Scholar]