Gordonia araii sp. nov. and Gordonia effusa sp. nov., isolated from patients in Japan

References

1. Collins M. D., Prouz T., Goodfellow M., Minikkin D. E. 1977; Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100:221–230 [CrossRef]
   [Google Scholar]
2. Ezaki T., Hashimoto Y., Yabuuchi E. 1989; Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224–229 [CrossRef]
   [Google Scholar]
3. Goodfellow M. 1998; Nocardia and related genera. In Topley and Wilson's Microbiology and Microbial Infections, 9th edn., vol. 2, Systematic Bacteriology pp  463–489 Edited by Balows A., Duerden B. I. London: Arnold;
   [Google Scholar]
4. Goodfellow M., Isik K., Yates E. 1999; Actinomycete systematics: an unfinished synthesis. Nova Acta Leopold NF80:31247–82
   [Google Scholar]
5. Iida S., Taniguchi H., Kageyama A., Yazawa K., Chibana H., Murata S., Nomura F., Kroppenstedt R. M., Mikami Y. 2005; Gordonia otitidis sp. nov., isolated from a patient with external otitis. Int J Syst Evol Microbiol 55:1871–1876 [CrossRef]
   [Google Scholar]
6. Kageyama A., Torikoe K., Iwamoto M. & 7 other authors (2004a). Nocardia arthritidis sp. nov., a new pathogen isolated from a patient with rheumatoid arthritis in Japan. J Clin Microbiol 42:2366–2371 [CrossRef]
   [Google Scholar]
7. Kageyama A., Poonwan N., Yazawa K., Mikami Y., Nishimura K. 2004b; Nocardia asiatica sp. nov. isolated from patients with nocardiosis in Japan and clinical specimens from Thailand. Int J Syst Evol Microbiol 54:125–130 [CrossRef]
   [Google Scholar]
8. Kämpfer P., Andersson M. A., Rainey F. A., Kroppenstedt R. M., Salkinoja-Salonen M. 1999; Williamsia muralis gen. nov., sp. nov. isolated from the indoor environment of a children's day care centre. Int J Syst Bacteriol 49:681–687 [CrossRef]
   [Google Scholar]
9. Kimura M., Ohta T. 1972; On the stochastic model for estimation of mutation distance between homologous proteins. J Mol Evol 2:87–90 [CrossRef]
   [Google Scholar]
10. Klatte S., Rainey F. A., Kroppenstedt R. M. 1994; Transfer of Rhodococcus aichiensis Tsukamura 1982 and Nocardia amarae Lechevalier and Lechevalier 1974 to the genus Gordona as Gordona aichiensis comb. nov. and Gordona amarae comb. nov. Int J Syst Bacteriol 44:769–773 [CrossRef]
    [Google Scholar]
11. Lechevalier M. P., Lechevalier H. A. 1980; The chemotaxonomy of actinomycetes. In Actinomycete Taxonomy pp  227–291 Edited by Dietz A., Thayer D. W. Fairfax, VA: Society for Industrial Microbiology;
    [Google Scholar]
12. Linos A., Berekaa M. M., Steinbüchel A., Kim K. K., Spröer C., Kroppenstedt M. 2002; Gordonia westfalica sp. nov., a novel rubber-degrading actinomycete. Int J Syst Evol Microbiol 52:1133–1139 [CrossRef]
    [Google Scholar]
13. Miyadoh M. 2001; Identification procedure at the genus level. In Identification Manual of Actinomycetes pp  9–19 Edited by Miyadoh S., Hamada M., Hotta K., Kudo T., Seino A., Suzuki K., Yokota A. Tokyo: Business Center for Academic Societies Japan;
    [Google Scholar]
14. Saito H., Miura K. 1983; Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72:619–629
    [Google Scholar]
15. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
16. Stackebrandt E., Smida J., Collins M. D. 1988; Evidence of phylogenetic heterogeneity within the genus Rhodococcus : revival of the genus Gordona (Tsukamura). J Gen Appl Microbiol 34:341–348 [CrossRef]
    [Google Scholar]
17. Stackebrandt E., Rainey F. A., Ward-Rainey N. L. 1997; Proposal for a new hierarchic classification system, Actinobacteria class nov. Int J Syst Bacteriol 47:479–491 [CrossRef]
    [Google Scholar]
18. Staneck J. L., Roberts G. D. 1974; Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography. Appl Microbiol 28:226–231
    [Google Scholar]
19. Takeuchi M., Hatano K. 1998; Gordonia rhizosphera sp. nov. isolated from the mangrove rhizosphere. Int J Syst Bacteriol 48:907–912 [CrossRef]
    [Google Scholar]
20. Thompson J. D., Higgins D. G., Gibson T. J. 1994; clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680 [CrossRef]
    [Google Scholar]
21. Tsukamura M. 1978; Numerical classification of Rhodococcus (formerly Gordona ) organisms recently isolated from sputa of patients; description of Rhodococcus sputi Tsukamura sp. nov. Int J Syst Bacteriol 28:169–181 [CrossRef]
    [Google Scholar]
22. Wayne L. G., Brenner D. J., Colwell R. R. 9 other authors 1987; Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37:463–464 [CrossRef]
    [Google Scholar]