Tamlana crocina gen. nov., sp. nov., a marine bacterium of the family Flavobacteriaceae, isolated from beach sediment in Korea

References

1. Bernardet J.-F., Segers P., Vancanneyt M., Berthe F., Kersters K., Vandamme P. 1996; Cutting a Gordian knot: emended classification and description of the genus Flavobacterium , emended description of the family Flavobacteriaceae , and proposal of Flavobacterium hydatis nom. nov. (basonym, Cytophaga aquatilis Strohl and Tait 1978). Int J Syst Bacteriol 46:128–148 [CrossRef]
   [Google Scholar]
2. Bernardet J.-F., Nakagawa Y., Holmes B. 2002; Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int J Syst Evol Microbiol 52:1049–1070 [CrossRef]
   [Google Scholar]
3. Bowman J. P., Nichols D. S. 2005; Novel members of the family Flavobacteriaceae from Antarctic maritime habitats including Subsaximicrobium wynnwilliamsii gen.nov., sp. nov., Subsaxibacter broadyi gen. nov., sp. nov., Lacinutrix copepodicola gen. nov., sp. nov., and novel species of the genera Bizionia , Gelidibacter and Gillisia . Int J Syst Evol Microbiol 55, 1471–1486 [CrossRef]
4. Bowman J. P., McCammon S. A., Brown J. L., Nichols P. D., McMeekin T. A. 1997; Psychroserpens burtonensis gen. nov., sp. nov., and Gelidibacter algens gen. nov., sp. nov., psychrophilic bacteria isolated from antarctic lacustrine and sea ice habitats. Int J Syst Bacteriol 47:670–677 [CrossRef]
   [Google Scholar]
5. Felsenstein J. 1981; Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17:368–376 [CrossRef]
   [Google Scholar]
6. Felsenstein J. 1985; Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791 [CrossRef]
   [Google Scholar]
7. Garrity G. M., Holt J. G. 2001; The road map to the Manual . In Bergey's Manual of Systematic Bacteriology , 2nd edn. vol 1 pp  119–168 Edited by Boone D. R., Castenholtz R. W., Garrity G. M. New York: Springer;
   [Google Scholar]
8. Ivanova E. P., Alexeeva Y. V., Flavier S., Wright J. P., Zhukova N. V., Gorshkova N. M., Mikhailov V. V., Nicolau D. V., Christen R. 2004; Formosa algae gen. nov., sp. nov. a novel member of the family Flavobacteriaceae . Int J Syst Evol Microbiol 54705–711 [CrossRef]
   [Google Scholar]
9. Jooste P. J. 1985; The taxonomy and significance of Flavobacterium–Cytophaga strains from dairy sources . PhD thesis University of the Orange Free State;
10. Jukes T. H., Cantor C. R. 1969; Evolution of protein molecules. In Mammalian Protein Metabolism pp  21–132 Edited by Munro H. N. New York: Academic Press;
    [Google Scholar]
11. Jung S.-Y., Kang S.-J., Lee M.-H., Lee S.-Y., Oh T.-K., Yoon J.-H. 2005; Gaetbulibacter saemankumensis gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from a tidal flat sediment in Korea. Int J Syst Evol Microbiol 55:1845–1849 [CrossRef]
    [Google Scholar]
12. Kroppenstedt R. M. 1985; Fatty acid and menaquinone analysis of actinomycetes and related organisms. In Chemical Methods in Bacterial Systematics pp  173–199 Edited by Goodfellow M., Minnikin D. E. London: Academic Press;
    [Google Scholar]
13. Küster E., Williams S. T. 1964; Selection of media for isolation of streptomycetes. Nature 202:928–929 [CrossRef]
    [Google Scholar]
14. Kwon K. K., Lee H.-S., Jung H.-B., Kang J.-H., Kim S.-J. 2006 Yeosuana aromativorans gen. nov., sp. nov., a mesophilic marine bacterium belonging to the family Flavobacteriaceae , isolated from estuarine sediment of the South Sea, Korea. Int J Syst Evol Microbiol 56727–732 [CrossRef]
15. Lee S. D. 2006; Kineococcus marinus sp. nov., isolated from marine sediment of the coast of Jeju, Korea. Int J Syst Evol Microbiol 56:1279–1283 [CrossRef]
    [Google Scholar]
16. Mesbah M., Premachandran U., Whitman W. B. 1989; Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39:159–167 [CrossRef]
    [Google Scholar]
17. Minnikin D. E., O'Donnell A. G., Goodfellow M., Alderson G., Athalye M., Schaal A., Parlett J. H. 1984; An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2:233–241 [CrossRef]
    [Google Scholar]
18. Nedashkovskaya O. I., Kim S. B., Han S. K., Rhee M.-S., Lysenko A. M., Rohde M., Zhukova N. V., Frolova G. M., Mikhailov V. V., Bae K. S. 2004; Algibacter lectus gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from green algae. Int J Syst Evol Microbiol 54:1257–1261 [CrossRef]
    [Google Scholar]
19. Nedashkovskaya O. I., Kim S. B., Han S. K., Snauwaert C., Vancanneyt M., Swings J., Kim K.-O., Lysenko A. M., Rohde M. other authors 2005a; Winogradskyella thalassocola gen. nov., sp. nov., Winogradskyella epiphytica sp. nov. and Winogradskyella eximia sp. nov. marine bacteria of the family Flavobacteriaceae . Int J Syst Evol Microbiol 5549–55 [CrossRef]
    [Google Scholar]
20. Nedashkovskaya O. I., Kim S. B., Lysenko A. M., Frolova G. M., Mikhailov V. V., Bae K. S. 2005b; Bizionia paragorgiae gen. nov., sp. nov. a novel member of the family Flavobacteriaceae isolated from the soft coral Paragorgia arborea . Int J Syst Evol Microbiol 55:375–378 [CrossRef]
    [Google Scholar]
21. Nichols C. M., Bowman J. P., Guezennec J. 2005; Olleya marilimosa gen. nov., an exopolysaccharide-producing marine bacterium from the family Flavobacteriaceae , isolated from the Southern Ocean. Int J Syst Evol Microbiol 55:1557–1561 [CrossRef]
    [Google Scholar]
22. Reichenbach H. 1989; Order I. Cytophagales Leadbetter 1974. In Bergey's Manual of Systematic Bacteriology vol  3 pp  2011–2013 Edited by Staley J. T., Bryant M. P., Pfennig N., Holt J. G. Baltimore: Williams & Wilkins;
    [Google Scholar]
23. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
24. Schmidt K., Cannor A., Britton G. 1994; Analysis of pigments: carotenoids and related polyenes. In Chemical Methods in Prokaryotic Systematics pp  403–448 Edited by Goodfellow M., O'Donnell A. G. Chichester: Wiley;
    [Google Scholar]
25. Shirling E. B., Gottlieb D. 1966; Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16:313–340 [CrossRef]
    [Google Scholar]
26. Thompson J. D., Gibson T. J., Plewniak F., Jeanmougin F., Higgins D. G. 1997; The clustal_x windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882 [CrossRef]
    [Google Scholar]