Lactobacillus composti sp. nov., a lactic acid bacterium isolated from a compost of distilled shochu residue

References

1. Cavalli-Sforza L. L., Edwards A. W. F. 1967; Phylogenetic analysis models and estimation procedures. Am J Hum Genet 19:233–257
   [Google Scholar]
2. Collins M. D., Rodrigues U. M., Ash C., Aguirre M., Farrow J. A. E., Martinez-Murcia A., Philips B. A., Williams A. M., Wallbanks S. 1991; Phylogenetic analysis of the genus Lactobacillus and related lactic acid bacteria as determined by reverse transcriptase sequencing of 16S rRNA. FEMS Microbiol Lett 77:5–12 [CrossRef]
   [Google Scholar]
3. Endo A., Okada S. 2005; Lactobacillus satsumensis sp. nov., isolated from mashes of shochu, a traditional Japanese distilled spirit made from fermented rice and other starchy materials. Int J Syst Evol Microbiol 55:83–85 [CrossRef]
   [Google Scholar]
4. Endo A., Okada S. 2006; Oenococcus kitaharae sp. nov., a non-acidophilic and non-malolactic-fermenting oenococcus isolated from a composting distilled shochu residue. Int J Syst Evol Microbiol 56:2345–2348 [CrossRef]
   [Google Scholar]
5. Endo A., Okada S. 2007; Lactobacillus farraginis sp. nov. and Lactobacillus parafarraginis sp. nov., heterofermentative lactobacilli isolated from a compost of distilled shochu residue. Int J Syst Evol Microbiol 57:708–712 [CrossRef]
   [Google Scholar]
6. Ezaki T., Yamamoto N., Ninomiya K., Suzuki S., Yabuuchi E. 1983; Transfer of Peptococcus indolicus , Peptococcus asaccharolyticus , and Peptococcus magnus to the genus Peptostreptococcus and proposal of Peptostreptococcus tetradius sp. nov. Int J Syst Bacteriol 33:683–698 [CrossRef]
   [Google Scholar]
7. Felsenstein J. 1985; Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791 [CrossRef]
   [Google Scholar]
8. Felsenstein J. 2005 phylip (Phylogeny Inference Package), version 3.6. Distributed by the author. Department of Genome Sciences University of Washington; Seattle, USA:
   [Google Scholar]
9. Hammes W. P., Hertel C. 2006; The genera Lactobacillus and Carnobacterium . In The Prokaryotes , 3rd edn. vol 4 pp  320–403 Edited by Dworkin M., Falkow S., Rosenberg E., Schleifer K.-H., Stackebrandt E. New York: Springer;
   [Google Scholar]
10. Kimura M. 1980; A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120 [CrossRef]
    [Google Scholar]
11. Kluge A. G., Farris J. S. 1969; Quantitative phyletics and the evolution of the anurans. Syst Zool 18:1–32 [CrossRef]
    [Google Scholar]
12. Leisner J. J., Vancanneyt M., Goris J., Christensen H., Rusul G. 2000; Description of Paralactobacillus selangorensis gen. nov., sp. nov. a new lactic acid bacterium isolated from chili bo, a Malaysian food ingredient. Int J Syst Evol Microbiol 50:19–24 [CrossRef]
    [Google Scholar]
13. Marmur J. 1961; A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Evol 3:208–218
    [Google Scholar]
14. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
15. Schleifer K. H., Ludwig W. 1995; Phylogeny of the genus Lactobacillus and related genera. Syst Appl Microbiol 18:461–467 [CrossRef]
    [Google Scholar]
16. Stackebrandt E., Goebel B. M. 1994; Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44:846–849 [CrossRef]
    [Google Scholar]
17. Thompson J. D., Gibson T. J., Plewniak F., Jeanmougin F., Higgins D. G. 1997; The clustal_x windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882 [CrossRef]
    [Google Scholar]