1887

Abstract

A Gram-positive, spore-forming, halophilic bacterial strain, FP5, was isolated from a salt lake in southern Spain and subjected to a polyphasic taxonomic study. Strain FP5 was strictly aerobic. Cells were coccoidal, occurring singly or in clusters. The cell-wall peptidoglycan type of strain FP5 was A4 based on -Orn–-Asp. Strain FP5 was characterized chemotaxonomically by having MK-7 as the major menaquinone and anteiso-C, anteiso-C, iso-C and iso-C as the main fatty acids. The isolate grew optimally at 37 °C and in presence of 10 % NaCl; no growth was observed in the absence of NaCl. The DNA G+C content was 43.5 mol%. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain FP5 falls within the evolutionary radiation of species of the genus . Levels of 16S rRNA gene sequence similarity between strain FP5 and the type strains of nine recognized species were in the range 97.0–99.0 %. Levels of DNA–DNA relatedness indicated that strain FP5 represents a genomic species that is distinct from recognized species. Strain FP5 could be differentiated from recognized species based on several phenotypic characteristics. On the basis of phenotypic, phylogenetic and genomic data, strain FP5 is considered to represent a novel species of the genus , for which the name sp. nov. is proposed. The type strain is FP5 (=DSM 18525 =ATCC BAA-1361).

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2008-04-01
2024-04-26
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References

  1. Amoozegar, M. A., Malekzadeh, F., Malik, K. A., Schumann, P. & Spröer, C.(2003).Halobacillus karajensis sp. nov., a novel moderate halophile. Int J Syst Evol Microbiol 53, 1059–1063.[CrossRef] [Google Scholar]
  2. An, S.-Y., Kanoh, K., Kasai, H., Goto, K. & Yokota, A.(2007).Halobacillus faecis sp. nov., a spore-forming bacterium isolated from a mangrove area on Ishigaki Island, Japan. Int J Syst Evol Microbiol 57, 2476–2479.[CrossRef] [Google Scholar]
  3. Cashion, P., Holder-Franklin, M. A., McCully, J. & Franklin, M.(1977). A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81, 461–466.[CrossRef] [Google Scholar]
  4. Claus, D., Fahmy, F., Rolf, H. J. & Tosunoglu, N.(1983).Sporosarcina halophila sp. nov., an obligate, slightly halophilic bacterium from salt marsh soils. Syst Appl Microbiol 4, 496–506.[CrossRef] [Google Scholar]
  5. De Ley, J., Cattoir, H. & Reynaerts, A.(1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133–142.[CrossRef] [Google Scholar]
  6. Dussault, H. P.(1955). An improved technique for staining red halophilic bacteria. J Bacteriol 70, 484–485. [Google Scholar]
  7. Groth, I., Schumann, P., Weiss, N., Martin, K. & Rainey, F. A.(1996).Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall. Int J Syst Bacteriol 46, 234–239.[CrossRef] [Google Scholar]
  8. Halebian, S., Harris, B., Finegold, S. M. & Rolfe, R.(1981). Rapid method that aids in distinguishing Gram-positive from Gram-negative anaerobic bacteria. J Clin Microbiol 13, 444–448. [Google Scholar]
  9. Hua, N.-P., Kanekiyo, A., Fujikura, K., Yasuda, H. & Naganuma, T.(2007).Halobacillus profundi sp. nov. and Halobacillus kuroshimensis sp. nov., moderately halophilic bacteria isolated from a deep-sea methane cold seep. Int J Syst Evol Microbiol 57, 1243–1249.[CrossRef] [Google Scholar]
  10. Huß, V. A. R., Festl, H. & Schleifer, K. H.(1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184–192.[CrossRef] [Google Scholar]
  11. Liu, W. Y., Zeng, J., Wang, L., Dou, Y. T. & Yang, S. S.(2005).Halobacillus dabanensis sp. nov. and Halobacillus aidingensis sp. nov., isolated from salt lakes in Xinjiang, China. Int J Syst Evol Microbiol 55, 1991–1996.[CrossRef] [Google Scholar]
  12. MacKenzie, S. L.(1987). Gas chromatographic analysis of amino acids as the N-heptafluorobutyryl isobutyl esters. J Assoc Off Anal Chem 70, 151–160. [Google Scholar]
  13. Nicolaus, B., Manca, M. C., Lama, L., Esposito, E. & Gambacorta, A.(2001). Lipid modulation by environmental stresses in two models of extremophiles isolated from Antarctica. Polar Biol 24, 1–8. [Google Scholar]
  14. Oren, A. & Galinski, E. A.(1994). Hydrolysis of N′-benzoyl-arginine-p-nitroanilide stereoisomers as a phenotypic test: a study of Gram-positive halotolerant bacteria. Syst Appl Microbiol 17, 7–10.[CrossRef] [Google Scholar]
  15. Oren, A., Ventosa, A. & Grant, W. D.(1997). Proposal of minimal standards for the description of new taxa in the order Halobacteriales. Int J Syst Bacteriol 47, 233–238.[CrossRef] [Google Scholar]
  16. Oren, A., Elevi, R., Watanabe, S., Ihara, K. & Corcelli, A.(2002).Halomicrobium mukohataei gen. nov., comb. nov., and emended description of Halomicrobium mukohataei. Int J Syst Evol Microbiol 52, 1831–1835.[CrossRef] [Google Scholar]
  17. Poli, A., Esposito, E., Lama, L., Orlando, P., Nicolaus, G., de Apollonia, F., Gambacorta, A. & Nicolaus, B.(2006).Anoxybacillus amylolyticus sp. nov., a thermophilic amylase producing bacterium isolated from Mount Rittmann (Antarctica). Syst Appl Microbiol 29, 300–307.[CrossRef] [Google Scholar]
  18. Reed, A. J., Lutz, R. A. & Vetriani, C.(2006). Vertical distribution and diversity of bacteria and archaea in sulphide and methane-rich cold seep sediments located at the base of the Florid Escarpment. Extremophiles 10, 199–211.[CrossRef] [Google Scholar]
  19. Romano, I., Manca, M. C., Lama, L., Nicolaus, B. & Gambacorta, A.(1993). A method for antibiotic assay on Sulfolobales. Biotechnol Tech 7, 439–440.[CrossRef] [Google Scholar]
  20. Romano, I., Poli, A., Finore, I., Huertas, F. J., Gambacorta, A., Pelliccione, S., Nicolaus, G., Lama, L. & Nicolaus, B.(2007).Haloterrigena hispanica sp. nov., an extremely halophilic archaeon from Fuente de Piedra, southern Spain. Int J Syst Evol Microbiol 57, 1499–1503.[CrossRef] [Google Scholar]
  21. Schleifer, K. H.(1985). Analysis of the chemical composition and primary structure of murein. Methods Microbiol 18, 123–156. [Google Scholar]
  22. Schleifer, K. H. & Kandler, O.(1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407–477. [Google Scholar]
  23. Shida, O., Takagi, H., Kadowaki, K., Nakamura, L. K. & Komagata, K.(1997). Transfer of Bacillus alginolyticus, Bacillus chondroitinus, Bacillus curdlanolyticus, Bacillus glucanolyticus, Bacillus kobensis, and Bacillus thiaminolyticus to the genus Paenibacillus and emended description of the genus Paenibacillus. Int J Syst Bacteriol 47, 289–298.[CrossRef] [Google Scholar]
  24. Spring, S., Ludwig, W., Marquez, M. C., Ventosa, A. & Schleifer, K.-H.(1996).Halobacillus gen. nov., with descriptions of Halobacillus litoralis sp. nov. and Halobacillus trueperi sp. nov., and transfer of Sporosarcina halophila to Halobacillus halophilus comb. nov. Int J Syst Bacteriol 46, 492–496.[CrossRef] [Google Scholar]
  25. Tamaoka, J. & Komagata, K.(1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125–128.[CrossRef] [Google Scholar]
  26. Yoon, J.-H., Weiss, N., Lee, K.-C., Lee, I.-S., Kang, K. H. & Park, Y.-H.(2001).Jeotgalibacillus alimentarius gen. nov., sp. nov., a novel bacterium isolated from jeotgal with l-lysine in the cell wall, and reclassification of Bacillus marinus Rüger 1983 as Marinibacillus marinus gen. nov., comb. nov. Int J Syst Evol Microbiol 51, 2087–2093.[CrossRef] [Google Scholar]
  27. Yoon, J.-H., Kang, K. H. & Park, Y.-H.(2003).Halobacillus salinus sp. nov., isolated from a salt lake on the coast of the East Sea in Korea. Int J Syst Evol Microbiol 53, 687–693.[CrossRef] [Google Scholar]
  28. Yoon, J.-H., Kang, K. H., Oh, T.-K. & Park, Y.-H.(2004).Halobacillus locisalis sp. nov., a halophilic bacterium isolated from a marine solar saltern of the Yellow Sea in Korea. Extremophiles 8, 23–28.[CrossRef] [Google Scholar]
  29. Yoon, J.-H., Kang, S.-J., Lee, C.-H., Oh, H. W. & Oh, T.-K.(2005).Halobacillus yeomjeoni sp. nov., isolated from a marine solar saltern in Korea. Int J Syst Evol Microbiol 55, 2413–2417.[CrossRef] [Google Scholar]
  30. Yoon, J.-H., Kang, S.-J., Jung, Y.-T. & Oh, T.-K.(2007).Halobacillus campisalis sp. nov., containing meso-diaminopimelic acid in the cell-wall peptidoglycan, and emended description of the genus Halobacillus. Int J Syst Evol Microbiol 57, 2021–2025.[CrossRef] [Google Scholar]
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Scanning electronic micrograph of cells of strain FP5 . Bar, 5 µm.

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Total polar lipids of strain FP5 . (A) Two-dimensional TLC of phospholipids detected by spraying the plate with Dittmer and Lester reagent. (B) Two-dimensional TLC of glycolipids detected by spraying the plate with α-naphthol reagent. The solvent system was chloroform/methanol/water (65:25:4 by vol.) for the first dimension and chloroform/methanol/acetic acid/water (85:15:12:4 by vol.) for the second dimension. (C) TLC of total polar lipids; the right half was sprayed with α-naphthol reagent and the left half was sprayed with Dittmer and Lester reagent. The solvent system was chloroform/methanol/water (65:25:4 by vol.).

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