1887

Abstract

and were described independently in 2011. Their type strains showed high levels of 16S rRNA gene sequence similarity (99.3 %). Phylogenetic analysis revealed that MCC 2278 and JCM 16166 formed a monophyletic group and showed distant relationships to other members of closely related genera such as , , and . The presence of large proportions of iso-C and iso-C with small amounts of iso-C distinguished MCC 2278 and JCM 16166 from other members of the genera and . Unlike other members of the genera and , MCC 2278 and JCM 16166 showed growth at low concentrations of NaCl. Thus, based on distinctive phylogenetic, chemotaxonomic and physiological features of these two organisms in comparison with other members of the genera and it is clear that they do not fit within the existing classification and deserve separate status. DNA–DNA hybridization between the two type strains was 63 %, indicating that they represent separate species. In this study, we propose the creation of a novel genus, gen. nov., to accommodate the two species with gen. nov., comb. nov. (type strain JCM 16166 = KCTC 19557) as the type species. comb. nov. (type strain MCC 2278 = DSM 23694) is also proposed.

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijsem.0.000490
2015-11-01
2024-04-20
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/65/11/3771.html?itemId=/content/journal/ijsem/10.1099/ijsem.0.000490&mimeType=html&fmt=ahah

References

  1. Baik K. S., Lim C. H., Park S. C., Choe H. N., Kim H. J., Kim D., Lee K. H., Seong C. N. ( 2011;). Zhihengliuella aestuarii sp. nov., isolated from tidal flat sediment. Int J Syst Evol Microbiol 61 16711676 [View Article] [PubMed].
    [Google Scholar]
  2. Chen H. H., Zhao G. Z., Park D. J., Zhang Y. Q., Xu L. H., Lee J. C., Kim C. J., Li W. J. ( 2009;). Micrococcus endophyticus sp. nov., isolated from surface-sterilized Aquilaria sinensis roots. Int J Syst Evol Microbiol 59 10701075 [View Article] [PubMed].
    [Google Scholar]
  3. Chen Y. G., Tang S. K., Zhang Y. Q., Liu Z. X., Chen Q. H., He J. W., Cui X. L., Li W. J. ( 2010;). Zhihengliuella salsuginis sp. nov., a moderately halophilic actinobacterium from a subterranean brine. Extremophiles 14 397402 [View Article] [PubMed].
    [Google Scholar]
  4. Chittpurna, Singh P. K., Verma D., Pinnaka A. K., Mayilraj S., Korpole S. ( 2011;). Micrococcus lactis sp. nov., isolated from dairy industry waste. Int J Syst Evol Microbiol 61 28322836 [View Article] [PubMed].
    [Google Scholar]
  5. Cohn F. ( 1872;). Untersuchungen über Bakterien. Beitr Biol Pflanz 1 127244 (in German).
    [Google Scholar]
  6. De Ley J., Cattoir H., Reynaerts A. ( 1970;). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12 133142 [View Article] [PubMed].
    [Google Scholar]
  7. Gonzalez J. M., Saiz-Jimenez C. ( 2002;). A fluorimetric method for the estimation of G+C mol% content in microorganisms by thermal denaturation temperature. Environ Microbiol 4 770773 [View Article] [PubMed].
    [Google Scholar]
  8. Hamada M., Shibata C., Tamura T., Suzuki K. ( 2013;). Zhihengliuella flava sp. nov., an actinobacterium isolated from sea sediment, and emended description of the genus Zhihengliuella . Int J Syst Evol Microbiol 63 47604764 [View Article] [PubMed].
    [Google Scholar]
  9. Huss V. A. R., Festl H., Schleifer K. H. ( 1983;). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4 184192 [View Article] [PubMed].
    [Google Scholar]
  10. Kloos W. E., Tornabene T. G., Schleifer K. H. ( 1974;). Isolation and characterization of micrococci from human skin, including two new species: Micrococcus lylae and Micrococcus kristinae . Int J Syst Bacteriol 24 79101 [View Article].
    [Google Scholar]
  11. Liu H., Xu Y., Ma Y., Zhou P. ( 2000;). Characterization of Micrococcus antarcticus sp. nov., a psychrophilic bacterium from Antarctica. Int J Syst Evol Microbiol 50 715719 [View Article] [PubMed].
    [Google Scholar]
  12. Liu X. Y., Wang B. J., Jiang C. Y., Liu S. J. ( 2007;). Micrococcus flavus sp. nov., isolated from activated sludge in a bioreactor. Int J Syst Evol Microbiol 57 6669 [View Article] [PubMed].
    [Google Scholar]
  13. Loveland-Curtze J., Miteva V. I., Brenchley J. E. ( 2011;). Evaluation of a new fluorimetric DNA-DNA hybridization method. Can J Microbiol 57 250255 [View Article] [PubMed].
    [Google Scholar]
  14. Marmur J. ( 1961;). A procedure for isolation of deoxyribonucleic acid from micro-organisms. J Mol Biol 3 208218 [View Article].
    [Google Scholar]
  15. Prakash O., Nimonkar Y., Munot H., Sharma A., Vemuluri V. R., Chavadar M. S., Shouche Y. S. ( 2014;). Description of Micrococcus aloeverae sp. nov., an endophytic actinobacterium isolated from Aloe vera. Int J Syst Evol Microbiol 64 34273433 [View Article].
    [Google Scholar]
  16. Sasser M. ( 1990). Identification of bacteria by gas chromatography of cellular fatty acids, MIDI Technical note 101., Newark, DE: MIDI Inc;.
    [Google Scholar]
  17. Schleifer K. H., Kandler O. ( 1972;). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36 407477 [PubMed].
    [Google Scholar]
  18. Tamura K., Stecher G., Peterson D., Filipski A., Kumar S. ( 2013;). mega6: molecular evolutionary genetics analysis version 6.0.. Mol Biol Evol 30 27252729 [View Article] [PubMed].
    [Google Scholar]
  19. Tang S. K., Wang Y., Chen Y., Lou K., Cao L. L., Xu L. H., Li W. J. ( 2009;). Zhihengliuella alba sp. nov., and emended description of the genus Zhihengliuella . Int J Syst Evol Microbiol 59 20252032 [View Article] [PubMed].
    [Google Scholar]
  20. Thompson J. D., Gibson T. J., Plewniak F., Jeanmougin F., Higgins D. G. ( 1997;). The clustal_x windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25 48764882 [View Article] [PubMed].
    [Google Scholar]
  21. Tindall B. J. ( 1990a;). A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. Syst Appl Microbiol 13 128130 [View Article].
    [Google Scholar]
  22. Tindall B. J. ( 1990b;). Lipid composition of Halobacterium lacusprofundi . FEMS Microbiol Lett 66 199202 [View Article].
    [Google Scholar]
  23. Wayne L. G., Brenner D. J., Colwell R. R., Grimont P. A. D., Kandler O., Krichevsky M. I., Moore L. H., Moore W. E. C., Murray R. G. E., other authors. ( 1987;). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37 463464 [View Article].
    [Google Scholar]
  24. Zhang Y. Q., Schumann P., Yu L. Y., Liu H. Y., Zhang Y. Q., Xu L. H., Stackebrandt E., Jiang C. L., Li W. J. ( 2007;). Zhihengliuella halotolerans gen. nov., sp. nov., a novel member of the family Micrococcaceae . Int J Syst Evol Microbiol 57 10181023 [View Article] [PubMed].
    [Google Scholar]
  25. Zhang J. Y., Liu X. Y., Liu S. J. ( 2010;). Agrococcus terreus sp. nov. and Micrococcus terreus sp. nov., isolated from forest soil. Int J Syst Evol Microbiol 60 18971903 [View Article] [PubMed].
    [Google Scholar]
  26. Zhao G. Z., Li J., Qin S., Zhang Y. Q., Zhu W. Y., Jiang C. L., Xu L. H., Li W. J. ( 2009;). Micrococcus yunnanensis sp. nov., a novel actinobacterium isolated from surface-sterilized Polyspora axillaris roots. Int J Syst Evol Microbiol 59 23832387 [View Article] [PubMed].
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijsem.0.000490
Loading
/content/journal/ijsem/10.1099/ijsem.0.000490
Loading

Data & Media loading...

Supplements

Supplementary Data

PDF
This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error