- Volume 58, Issue 7, 2008
Volume 58, Issue 7, 2008
- Validation List
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List of new names and new combinations previously effectively, but not validly, published
The purpose of this announcement is to effect the valid publication of the following effectively published new names and new combinations under the procedure described in the Bacteriological Code (1990 Revision). Authors and other individuals wishing to have new names and/or combinations included in future lists should send three copies of the pertinent reprint or photocopies thereof, or an electronic copy of the published paper, to the IJSEM Editorial Office for confirmation that all of the other requirements for valid publication have been met. It is also a requirement of IJSEM and the ICSP that authors of new species, new subspecies and new combinations provide evidence that types are deposited in two recognized culture collections in two different countries (i.e. documents certifying deposition and availability of type strains). It should be noted that the date of valid publication of these new names and combinations is the date of publication of this list, not the date of the original publication of the names and combinations. The authors of the new names and combinations are as given below, and these authors' names will be included in the author index of the present issue and in the volume author index. Inclusion of a name on these lists validates the publication of the name and thereby makes it available in bacteriological nomenclature. The inclusion of a name on this list is not to be construed as taxonomic acceptance of the taxon to which the name is applied. Indeed, some of these names may, in time, be shown to be synonyms, or the organisms may be transferred to another genus, thus necessitating the creation of a new combination.
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- Notification List
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Notification that new names and new combinations have appeared in volume 58, part 4, of the IJSEM
This listing of names published in a previous issue of the IJSEM is provided as a service to bacteriology to assist in the recognition of new names and new combinations. This procedure was proposed by the Judicial Commission [Minute 11(ii), Int J Syst Bacteriol 41 (1991), p. 185]. The names given herein are listed according to the Rules of priority (i.e. page number and order of valid publication of names in the original articles). Taxonomic opinions included in this List (i.e. the creation of synonyms or the emendation of circumscriptions) cannot be considered as validly published nor, in any other way, approved by the International Committee on Systematics of Prokaryotes and its Judicial Commission.
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- List Of Changes In Taxonomic Opinion
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Notification of changes in taxonomic opinion previously published outside the IJSEM
The Bacteriological Code deals with the nomenclature of prokaryotes. This may include existing names (the Approved Lists of Bacterial Names) as well as new names and new combinations. In this sense the Code is also dealing indirectly with taxonomic opinions. However, as with most codes of nomenclature there are no mechanisms for formally recording taxonomic opinions that do not involve the creation of new names or new combinations. In particular, it would be desirable for taxonomic opinions resulting from the creation of synonyms or emended descriptions to be made widely available to the public. In 2004, the Editorial Board of the International Journal of Systematic and Evolutionary Microbiology (IJSEM) agreed unanimously that it was desirable to cover such changes in taxonomic opinions (i.e. the creation of synonyms or the emendation of circumscriptions) previously published outside the IJSEM, and to introduce a List of Changes in Taxonomic Opinion [Notification of changes in taxonomic opinion previously published outside the IJSEM; Euzéby et al. (2004). Int J Syst Evol Microbiol 54, 1429–1430]. Scientists wishing to have changes in taxonomic opinion included in future lists should send one copy of the pertinent reprint or a photocopy or a PDF file thereof to the IJSEM Editorial Office or to the Lists Editor. It must be stressed that the date of proposed taxonomic changes is the date of the original publication not the date of publication of the list. Taxonomic opinions included in the List of Changes in Taxonomic Opinion cannot be considered as validly published nor, in any other way, approved by the International Committee on Systematics of Prokaryotes and its Judicial Commission. The names that are to be used are those that are the ‘correct names’ (in the sense of Principle 6) in the opinion of the bacteriologist, with a given circumscription, position and rank. A particular name, circumscription, position and rank does not have to be adopted in all circumstances. Consequently, the List of Changes in Taxonomic Opinion must be considered as a service to bacteriology and it has no ‘official character’, other than providing a centralized point for registering/indexing such changes in a way that makes them easily accessible to the scientific community.
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- New Taxa
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- Actinobacteria
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Micromonospora pattaloongensis sp. nov., isolated from a Thai mangrove forest
More LessAn actinomycete, designated strain TJ2-2T, was isolated from soil collected from a mangrove forest in Pattaloong Province, Thailand, and was subjected to morphological and chemotaxonomic analysis and phylogenetic investigation based on 16S rRNA gene sequences. The data from these analyses indicated that the novel strain should be classified as a member of the genus Micromonospora and that the closest relative was Micromonospora olivasterospora DSM 43868T (98.7 % gene sequence similarity). The DNA–DNA hybridization data and some physiological and biochemical properties indicated that the novel strain could be readily distinguished from its closest phylogenetic relatives. On the basis of these phenotypic and genotypic data, strain TJ2-2T represents a novel species of the genus Micromonospora, for which the name Micromonospora pattaloongensis sp. nov. is proposed. The type strain is TJ2-2T (=JCM 12833T=TISTR 1559T).
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Fodinicola feengrottensis gen. nov., sp. nov., an actinomycete isolated from a medieval mine
More LessA filamentous, Gram-positive actinobacterium was isolated from acidic rocks in a medieval alum slate mine and was investigated by means of a polyphasic taxonomic approach. A 16S rRNA gene sequence similarity study indicated that strain HKI 0501T forms an individual line of descent and is related to certain members of the suborder Frankineae, order Actinomycetales (<95 % sequence similarity). Distance-matrix and neighbour-joining analyses set the branching point of the novel isolate between two clades, one being represented by members of the genus Cryptosporangium (family ‘Kineosporiaceae’) and the other by members of the genera Frankia and Acidothermus (family Frankiaceae and family Acidothermaceae, respectively). The organism had meso-diaminopimelic acid as the diagnostic diamino acid in the cell-wall peptidoglycan and xylose as the characteristic cell-wall sugar. The muramic acid in the peptidoglycan was found to be N-acetylated. The major menaquinones were MK-9(H4), MK-9(H6) and MK-9(H8) and the fatty acid profile was characterized by the predominance of iso-C16 : 0, 10-methyl C17 : 0, C17 : 1 cis9 and 10-methyl iso-C18 : 0. The polar lipids comprised diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylserine, phosphatidylinositol and several unknown phospholipids and glycolipids. Mycolic acids were absent. The DNA G+C content was 65 mol%. The distinct phylogenetic position and the phenotypic markers that clearly separate the novel organism from all other members of the suborder Frankineae indicate that strain HKI 0501T represents a novel genus and species, for which the name Fodinicola feengrottensis gen. nov., sp. nov. is proposed. The type strain of Fodinicola feengrottensis is HKI 0501T (=DSM 19247T =JCM 14718T).
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Nocardiopsis valliformis sp. nov., an alkaliphilic actinomycete isolated from alkali lake soil in China
More LessA strain (HBUM 20028T) isolated from alkali lake soil in China was studied by a polyphasic taxonomic approach. The strain produced abundant aerial and substrate mycelia. Long spore chains were borne on the aerial mycelium, and the substrate mycelium was often arranged in a shape like a fence or palisade. The special characteristic of strain HBUM 20028T was its abundant growth under alkaline conditions, at pH 8.0–14.0. The cell wall of strain HBUM 20028T contained meso-diaminopimelic acid but no diagnostic sugar. Major phospholipids included diphosphatidylglycerol and phosphatidylcholine. The major menaquinones were MK-10(H2), MK-10(H4) and MK-10(H6). The major cellular fatty acids were iso-C16 : 0 (31.66 %), anteiso-C17 : 0 (14.85 %) and C18 : 1 ω9c (14.73 %). All of these characters consistently indicated that strain HBUM 20028T belongs to the genus Nocardiopsis. DNA–DNA hybridization between the strain and type strains of related species gave relatedness values far below 70 %. Based on 16S rRNA gene sequence analysis, DNA relatedness and phenotypic characteristics, a novel species with the name Nocardiopsis valliformis sp. nov. is proposed. The type strain is HBUM 20028T (=DSM 45023T =CGMCC 4.2135T).
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Humibacillus xanthopallidus gen. nov., sp. nov.
More LessStrain KV-663T was isolated from a soil sample collected from a paddy field in Japan by using GPM agar plates. Strain YM21-029 was obtained from a lake sediment sample by using HSV agar. The two novel strains were Gram-positive, catalase-positive, rod-shaped bacteria with ll-diaminopimelic acid as the diagnostic diamino acid of the cell-wall peptidoglycan. The major menaquinone was MK-8(H4). Mycolic acids were not detected. The G+C content of the DNA was 69–70 mol%. 16S rRNA gene sequence analysis revealed that these strains represent a novel lineage within the family Intrasporangiaceae, order Actinomycetales, and are related to members of the genera Intrasporangium and Terracoccus. Based on morphological, biochemical and chemotaxonomic properties, together with phylogenetic analysis based on 16S rRNA gene sequences, the two new strains are considered to represent a novel species of a new genus, for which the name Humibacillus xanthopallidus gen. nov., sp. nov. is proposed. The type strain of the type species, Humibacillus xanthopallidus, is KV-663T (=NRRL B-24471T=NBRC 101803T).
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Catenulispora subtropica sp. nov. and Catenulispora yoronensis sp. nov.
More LessThree strains of actinomycetes that formed spore chains were isolated from a paddy field and forest soil and subjected to a polyphasic taxonomic characterization study. The cell wall peptidoglycan contained ll-diaminopimelic acid and glycine. The major isoprenoid quinones were MK-9(H8) and MK-9(H6), and the major cellular fatty acids were iso-C16 : 0 and anteiso-C17 : 0. Phylogenetic analysis based on 16S rRNA gene sequences showed that these organisms belonged in a monophyletic cluster with members of the genus Catenulispora. According to the physiological, biochemical and chemotaxonomic data, the novel organisms could be differentiated from recognized members of the genus Catenulispora. Based on the phenotypic and genotypic data, the three strains are considered to represent two novel species of the genus Catenulispora, for which the names Catenulispora subtropica sp. nov. for strains TT 99-48T (type strain; =NBRC 103395T=KCTC 19328T) and TT 01-19 (=NBRC 103396), and Catenulispora yoronensis sp. nov. (type strain TT N02-20T=NBRC 103397T=KCTC 19327T) are proposed. An emended description of the genus Catenulispora is given.
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Streptomonospora halophila sp. nov., a halophilic actinomycete isolated from a hypersaline soil
More LessAn actinomycete strain, designated YIM 91355T, was isolated from a soil sample collected from a hypersaline soil in Xinjiang Province, China, and its taxonomic position was investigated by using a polyphasic approach. The strain grew well on most media tested and no diffusible pigment was produced. The aerial mycelium of this organism was well developed but not fragmented and, at maturity, formed short chains of spores. Substrate mycelium was branched with non-fragmenting hyphae and single, oval to round spores were formed, borne on sporophores. Strain YIM 91355T contained meso-diaminopimelic acid as the diagnostic amino acid. The purified cell-wall hydrolysate contained galactose. The predominant menaquinones were MK-10(H8) (43.2 %), MK-10(H6) (17.7 %) and MK-11(H8) (10.4 %). Phospholipids were phosphatidylglycerol, diphosphatidylglycerol, phosphatidylinositol mannosides, phosphatidylcholine, phosphatidylinositol and an unidentified phospholipid. The major fatty acids were i-C16 : 0, ai-C17 : 0, 10-methyl C17 : 0 and 10-methyl C18 : 0. The G+C content of the genomic DNA was 72.1 mol%. Phylogenetic analysis indicated that the isolate belongs to the genus Streptomonospora of the family Nocardiopsaceae. Based on phenotypic and genotypic data, it is concluded that strain YIM 91355T represents a novel species of the genus Streptomonospora, for which the name Streptomonospora halophila sp. nov. (type strain YIM 91355T =DSM 45075T =KCTC 19236T) is proposed.
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Streptacidiphilus anmyonensis sp. nov., Streptacidiphilus rugosus sp. nov. and Streptacidiphilus melanogenes sp. nov., acidophilic actinobacteria isolated from Pinus soils
More LessThe taxonomic positions of 22 spore-forming, extensively branched actinobacteria isolated from Pinus soils were examined using a polyphasic approach. Analysis of the 16S rRNA gene sequences indicated that all of the isolates fell into three distinctive phylogenetic clusters within the genus Streptacidiphilus of the family Streptomycetaceae, and also that Streptacidiphilus jiangxiensis was the species closest to the three phyloclusters, with 16S rRNA gene sequence similarities ranging from 98.0 to 99.2 %. However, the low DNA–DNA relatedness values between representatives of the three clusters and S. jiangxiensis clearly differentiated them from one another. Representative isolates were also found to have chemotaxonomic features typical of the genus Streptacidiphilus and were distinguishable from all established species of Streptacidiphilus on the basis of a combination of phenotypic properties. It is evident from this study that each of the three phyloclusters should be equated with three novel Streptacidiphilus species, for which the following names are proposed: Streptacidiphilus anmyonensis sp. nov. (type strain AM11T =NBRC 103185T =KCTC 19278T), Streptacidiphilus rugosus sp. nov. (type strain AM16T =NBRC 103186T =KCTC 19279T) and Streptacidiphilus melanogenes sp. nov. (type strain SB-B34T =NBRC 103184T =KCTC 19280T).
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Microbacterium aquimaris sp. nov., isolated from seawater
More LessStrains JS54-2T and JS63-1 were isolated from seawater at Jeju, Korea. Cells of these strains were Gram-positive, non-motile, non-spore-forming, short rods and formed yellow-pigmented colonies on tryptic soy agar. The strains had chemotaxonomic markers that were consistent with their classification in the genus Microbacterium, i.e. MK-11, MK-12 and MK-10 as the major menaquinones, fatty acids that were predominantly iso- and anteiso-branched, galactose and glucose as the cell-wall sugars, peptidoglycan-type B2β with glycolyl residues and DNA G+C contents of 69.3–69.6 mol%. A phylogenetic analysis based on 16S rRNA gene sequences showed that the strains were closely related to Microbacterium oleivorans DSM 16091T and Microbacterium halophilum IFO 16062T (with 97.7 and 97.4 % sequence similarity, respectively) and formed a separate lineage with M. halophilum in the genus Microbacterium. Data from DNA–DNA hybridization and phenotypic analyses supported the conclusion that strains JS54-2T and JS63-1 represent a novel species in the genus Microbacterium, for which the name Microbacterium aquimaris sp. nov. is proposed. The type strain is JS54-2T (=KCTC 19124T =DSM 19713T).
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Pseudosporangium ferrugineum gen. nov., sp. nov., a new member of the family Micromonosporaceae
More LessAn actinomycete strain 3-44-a(19)T was isolated from sandy soil collected in Bangladesh. The strain formed irregular pseudosporangia directly from aggregated spore chains above the rudimentary aerial mycelium. The pseudosporangia developed singly. Each pseudosporangium contained many small, non-motile, spherical, smooth-surfaced spores in chains. Strain 3-44-a(19)T contained meso- and 3-hydroxydiaminopimelic acid in the cell wall and MK-9(H6) as the major menaquinone and arabinose, galactose, glucose, mannose, ribose and xylose were present in the whole-cell hydrolysate. The diagnostic phospholipid was phosphatidylethanolamine and iso-C15 : 0 (24.6 %), C18 : 1 ω9c (15.5 %), C16 : 0 (10.6 %), C18 : 0 (9.4 %), iso-C16 : 0 (8.6 %) and anteiso-C15 : 0 (6.0 %) were detected as the major cellular fatty acids. The acyl type of the peptidoglycan was glycolyl and mycolic acids were not detected. The G+C content of the DNA was 73.6 mol%. The chemotaxonomic data indicated that the strain belonged to the family Micromonosporaceae. Phylogenetic analysis based on 16S rRNA gene sequence data also suggested that strain 3-44-a(19)T fell within the family Micromonosporaceae. On the basis of phylogenetic analysis and characteristic patterns of 16S rRNA gene signature nucleotides as well as morphological and chemotaxonomic data, this strain should be classified as a member of a new genus and species, Pseudosporangium ferrugineum gen. nov., sp. nov., in the family Micromonosporaceae. The type strain of Pseudosporangium ferrugineum is 3-44-a(19)T (=JCM 14710T =MTCC9007T).
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Actinomadura bangladeshensis sp. nov. and Actinomadura chokoriensis sp. nov.
More LessThe taxonomic position of two soil isolates, 3-46-b(3)T and 3-45-a(11)T, was clarified based on data from a polyphasic study. The organisms showed a combination of chemotaxonomic and morphological properties typical of the genus Actinomadura. They formed distinct phyletic lines in the Actinomadura 16S rRNA gene tree and were closely associated with the type strains of Actinomadura meyerae (sequence similarity of 98.3–98.5 %), Actinomadura napierensis (98.1–98.3 %) and Actinomadura latina (96.4–96.8 %). The level of 16S rRNA gene sequence similarity between the new isolates was 99.1 %. The level of DNA–DNA hybridization between strains 3-46-b(3)T and 3-45-a(11)T was 43.6 % and levels of relatedness between the two new isolates and the type strains of A. meyerae and A. napierensis were 21.0–27.3 %. On the basis of phenotypic and genotypic properties, the new isolates could be differentiated from each other and from their closest phylogenetic relatives. It is proposed that the organisms be classified as representing two novel species of the genus Actinomadura. The names proposed for these taxa are Actinomadura bangladeshensis sp. nov. [type strain 3-46-b(3)T =JCM 13933T =MTCC8057T] and Actinomadura chokoriensis sp. nov. [type strain 3-45-a(11)T =JCM 13932T =MTCC8056T].
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Microbacterium luticocti sp. nov., isolated from sewage sludge compost
More LessStrain SC-087BT, isolated from sewage sludge compost during a study of bacterial diversity in composts, was characterized. The isolate was a Gram-positive, short rod that was motile, catalase- and oxidase-negative and able to grow at 27–45 °C, pH 5.5–9.7 and in up to 10 % NaCl. The peptidoglycan was of the B2β type, containing the characteristic amino acids ornithine, homoserine and hydroxyglutamic acid. The muramic acid residues of the peptidoglycan were partially glycolylated. The major cell-wall sugar was mannose; traces of xylose were also detected. The predominant fatty acids, comprising more than 70 % of the total, were anteiso-C17 : 0 and anteiso-C15 : 0, the major respiratory quinone was menaquinone-12 (MK-12) and the G+C content of the genomic DNA was 72 mol%. Based on analysis of the 16S rRNA gene sequence, the closest phylogenetic neighbours of strain SC-087BT were members of the family Microbacteriaceae, showing sequence similarity values of around 96 % with members of the species Microbacterium barkeri (96.0 %), Microbacterium gubbeenense (95.6 %) and Microbacterium indicum (95.7 %). The chemotaxonomic and phenotypic traits analysed supported the inclusion of this strain within the genus Microbacterium and the proposal of a novel species. The name Microbacterium luticocti sp. nov. is proposed and the type strain is SC-087BT (=DSM 19459T=CCUG 54537T).
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- Archaea
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Halorubrum luteum sp. nov., isolated from Lake Chagannor, Inner Mongolia, China
More LessA novel halophilic archaeon, strain CGSA15T, was isolated from water of Lake Chagannor in China. The strain grew optimally at 33–37 °C, pH 9.5–10.0 and 4.0–4.3 M NaCl. The major polar lipids were phosphatidylglycerol and phosphatidylglycerol phosphate methyl ester. The genomic DNA G+C content of strain CGSA15T was 60.2 mol%. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain CGSA15T was a member of the genus Halorubrum and was related most closely to Halorubrum alkaliphilum AS 1.3528T (96.1 % similarity) and Halorubrum tibetense AS 1.3239T (96.9 %). Levels of DNA–DNA relatedness between strain CGSA15T and Hrr. alkaliphilum AS 1.3528T and Hrr. tibetense AS 1.3239T were 36.7 and 28.9 %, respectively. According to the phenotypic and genotypic data presented, strain CGSA15T is considered to represent a novel species of the genus Halorubrum, for which the name Halorubrum luteum sp. nov. is proposed. The type strain is CGSA15T (=CGMCC 1.6783T =CECT 7303T).
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- Bacteroidetes
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Sphingobacterium kitahiroshimense sp. nov., isolated from soil
A novel exopolysaccharide-degrading bacterium, designated strain 10CT, was isolated from soil from Kitahiroshima city, Hokkaido, Japan. The novel isolate was Gram-negative, strictly aerobic and chemoheterotrophic. The DNA G+C content was 36.9 mol%. Major fatty acids were C16 : 1 ω7c, iso-C15 : 0 2-OH, iso-C15 : 0 and iso-C17 : 0 3-OH. 16S rRNA gene sequence analysis and chemotaxonomic and morphological data indicated that the novel strain clearly belonged to the genus Sphingobacterium. Based on phenotypic properties and DNA–DNA hybridization data, the new isolate was assigned to the genus Sphingobacterium as Sphingobacterium kitahiroshimense sp. nov. The type strain is 10CT (=JCM 14970T=NCIMB 14398T).
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Muricauda lutimaris sp. nov., isolated from a tidal flat of the Yellow Sea
More LessA Gram-negative, non-motile, rod-shaped bacterial strain, SMK-108T, was isolated from a tidal flat of the Yellow Sea in Korea and was subjected to a polyphasic taxonomic investigation. Strain SMK-108T grew optimally at pH 7.0–8.0 and at 30 °C. It contained MK-6 as the predominant menaquinone. The major fatty acids were iso-C17 : 0 3-OH, iso-C15 : 1 and iso-C15 : 0. The DNA G+C content was 41.1 mol%. Comparative 16S rRNA gene sequence analysis showed that strain SMK-108T was related most closely to members of the genus Muricauda, exhibiting 96.6–98.8 % sequence similarity to the type strains of recognized Muricauda species. Strain SMK-108T was distinguishable from recognized Muricauda species on the basis of differential phenotypic characteristics, levels of DNA–DNA relatedness and phylogenetic distinctiveness. This organism is thus considered to represent a novel species of the genus Muricauda, for which the name Muricauda lutimaris sp. nov. is proposed. The type strain is SMK-108T (=KCTC 22173T =CCUG 55324T).
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Pedobacter agri sp. nov., from soil
A Gram-negative strain, PB92T, which belongs to the family Sphingobacteriaceae, was isolated from soil (Daejeon, Korea). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain PB92T was associated with the genus Pedobacter and was most closely related to the type strains Pedobacter sandarakinus DS-27T (97.7 %), Pedobacter roseus CL-GP80T (97.5 %) and Pedobacter suwonensis 15-52T (97.5 %). The major cellular fatty acid components of strain PB92T were C16 : 1 ω7c (21.4 %), iso-C15 : 0 (30.8 %), iso-C17 : 0 3-OH (9.3 %) and iso-C15 : 0 2-OH (11.2 %). The G+C content of the genomic DNA from strain PB92T was 41.4 mol%. Analysis of 16S rRNA gene sequences, as well as physiological and biochemical tests, indicated that strain PB92T could be differentiated genotypically and phenotypically from reference species of the genus Pedobacter. Strain PB92T (=KCTC 12511T=DSM 19486T) is proposed as the type strain of a novel species, Pedobacter agri sp. nov.
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Robiginitalea myxolifaciens sp. nov., a novel myxol-producing bacterium isolated from marine sediment, and emended description of the genus Robiginitalea
More LessA marine, Gram-negative, deep-orange-coloured, rod/coccoid-shaped, strictly aerobic, non-motile, oxidase- and catalase-positive bacterial strain, designated YM6-073T, was isolated from sediment collected in Okinawa, Japan. Strain YM6-073T produced the carotenoid (3R,2′S)-myxol. A phylogenetic analysis based on 16S rRNA gene sequences revealed that strain YM6-073T belonged to a distinct lineage in the family Flavobacteriaceae, the closest relative being Robiginitalea biformata HTCC2501T (93.7 % sequence similarity). Strain YM6-073T could be distinguished from other members of the family Flavobacteriaceae by means of a number of phenotypic characteristics. The DNA G+C content was 50.1 mol%. The predominant cellular fatty acids were iso-C15 : 0, iso-C15 : 1 ω10c, iso-C17 : 0 3-OH and C15 : 0, and menaquinone-6 was the only respiratory quinone. DNA–DNA hybridization between strain YM6-073T and R. biformata DSM 15991T showed less than 10 % DNA–DNA relatedness. On the basis of phenotypic, genotypic and phylogenetic features, strain YM6-073T represents a novel species of the genus Robiginitalea, for which the name Robiginitalea myxolifaciens sp. nov. is proposed. The type strain is YM6-073T (=MBIC 06409T=KCTC 22216T=DSM 21019T).
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Flavobacterium lindanitolerans sp. nov., isolated from hexachlorocyclohexane-contaminated soil
More LessA Gram-negative, non-spore-forming, cream–yellow-pigmented bacterial strain, IP-10T, was isolated from soil samples from a waste site highly contaminated with hexachlorocyclohexane in Ummari village, India. The organism showed the highest 16S rRNA gene sequence similarity of 92.7 % with Flavobacterium soli KCTC 12542T and levels of 87–92 % with the type strains of other recognized species of the genus Flavobacterium. The DNA G+C content of strain IP-10T was 31 mol%. The predominant fatty acids were iso-C15 : 0 (22.1 %), iso-C17 : 0 3-OH (18.5 %) and summed feature 3 (comprising C16 : 1 ω7c and/or iso-C15 : 0 2-OH; 13.2 %). Strain IP-10T could be differentiated from recognized species of the genus Flavobacterium based on a number of phenotypic features. Strain IP-10T is therefore considered to represent a novel species of the genus Flavobacterium, for which the name Flavobacterium lindanitolerans sp. nov. is proposed. The type strain is IP-10T (=MTCC 8597T=CCM 7424T).
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Volumes and issues
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Volume 74 (2024)
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