Paenibacillus phoenicis sp. nov., isolated from the Phoenix Lander assembly facility and a subsurface molybdenum mine

References

1. Akagawa-Matsushita M., Itoh T., Katayama Y., Kuraishi H., Yamasato K. 1992; Isoprenoid quinone composition of some marine Alteromonas, Marinomonas, Deleya, Pseudomonas and Shewanella species. J Gen Microbiol 138:2275–2281 [CrossRef]
   [Google Scholar]
2. Ash C., Farrow J. A. E., Wallbanks S., Collins M. D. 1991; Phylogenetic heterogeneity of the genus Bacillus revealed by comparative analysis of small subunit-ribosomal RNA sequences. Lett Appl Microbiol 13:202–206 [View Article]
   [Google Scholar]
3. Cole R. M., Popkin T. J. 1981; Electron microscopy. In Manual of Methods for General Bacteriology pp. 34–51 Edited by Gerhardt P., Murray R. G. E., Costilaw R. N., Nester E. W., Wood W. A., Krieg N. R., Phillips G. B. Washington, D.C.: American Society for Microbiology;
   [Google Scholar]
4. Ezaki T., Hashimoto Y., Yabuuchi E. 1989; Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224–229 [View Article]
   [Google Scholar]
5. Ghosh S., Osman S., Vaishampayan P., Venkateswaran K. 2010; Recurrent isolation of extremotolerant bacteria from the clean room where Phoenix spacecraft components were assembled. Astrobiology 10:325–335 [CrossRef]
   [Google Scholar]
6. Healy M., Huong J., Bittner T., Lising M., Frye S., Raza S., Schrock R., Manry J., Renwick A. et al. 2005; Microbial DNA typing by automated repetitive-sequence-based PCR. J Clin Microbiol 43:199–207 [View Article][PubMed]
   [Google Scholar]
7. Kempf M. J., Chen F., Kern R., Venkateswaran K. 2005; Recurrent isolation of hydrogen peroxide-resistant spores of Bacillus pumilus from a spacecraft assembly facility. Astrobiology 5:391–405 [View Article][PubMed]
   [Google Scholar]
8. La Duc M. T., Nicholson W., Kern R., Venkateswaran K. 2003; Microbial characterization of the Mars Odyssey spacecraft and its encapsulation facility. Environ Microbiol 5:977–985 [View Article][PubMed]
   [Google Scholar]
9. La Duc M. T., Dekas A. E., Osman S., Moissl C., Newcombe D., Venkateswaran K. 2007; Isolation and characterization of bacteria capable of tolerating the extreme conditions of clean room environments. Appl Environ Microbiol 73:2600–2611 [View Article][PubMed]
   [Google Scholar]
10. La Duc M. T., Osman S., Venkateswaran K. 2009; Comparative analysis of methods for the purification of DNA from low-biomass samples based on total yield and conserved microbial diversity. J Rapid Meth Auto Microbiol 17:350–368 [View Article]
    [Google Scholar]
11. Mayhew L. E., Swanner E. D., Martin A. P., Templeton A. S. 2008; Phylogenetic relationships and functional genes: distribution of a gene (mnxG) encoding a putative manganese-oxidizing enzyme in Bacillus species. Appl Environ Microbiol 74:7265–7271 [View Article][PubMed]
    [Google Scholar]
12. Newcombe D. A., Schuerger A. C., Benardini J. N., Dickinson D., Tanner R., Venkateswaran K. 2005; Survival of spacecraft-associated microorganisms under simulated martian UV irradiation. Appl Environ Microbiol 71:8147–8156 [View Article][PubMed]
    [Google Scholar]
13. Osman S., Satomi M., Venkateswaran K. 2006; Paenibacillus pasadenensis sp. nov. and Paenibacillus barengoltzii sp. nov., isolated from a spacecraft assembly facility. Int J Syst Evol Microbiol 56:1509–1514 [View Article][PubMed]
    [Google Scholar]
14. Puleo J. R., Fields N. D., Bergstrom S. L., Oxborrow G. S., Stabekis P. D., Koukol R. 1977; Microbiological profiles of the Viking spacecraft. Appl Environ Microbiol 33:379–384[PubMed]
    [Google Scholar]
15. Sahl J. W., Schmidt R., Swanner E. D., Mandernack K. W., Templeton A. S., Kieft T. L., Smith R. L., Sanford W. E., Callaghan R. L. et al. 2008; Subsurface microbial diversity in deep-granitic-fracture water in Colorado. Appl Environ Microbiol 74:143–152 [View Article][PubMed]
    [Google Scholar]
16. Sambrook J., Fritsch E. F., Maniatis T. 1989 Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory;
    [Google Scholar]
17. Stackebrandt E., Goebel B. M. 1994; Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Evol Microbiol 44:846–849
    [Google Scholar]
18. Staneck J. L., Roberts G. D. 1974; Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography. Appl Microbiol 28:226–231[PubMed]
    [Google Scholar]
19. Tamaoka J., Komagata K. 1984; Determination of DNA base composition by reverse-phase high-performance liquid chromatography. FEMS Microbiol Lett 25:125–128 [View Article]
    [Google Scholar]
20. Tamura K., Dudley J., Nei M., Kumar S. 2007; mega4: molecular evolutionary genetics analysis (mega) software version 4.0. Mol Biol Evol 24:1596–1599 [View Article][PubMed]
    [Google Scholar]
21. Venkateswaran K., Satomi M., Chung S., Kern R., Koukol R., Basic C., White D. C. 2001; Molecular microbial diversity of a spacecraft assembly facility. Syst Appl Microbiol 24:311–320 [View Article][PubMed]
    [Google Scholar]
22. Venkateswaran K., Kempf M., Chen F., Satomi M., Nicholson W., Kern R. 2003; Bacillus nealsonii sp. nov., isolated from a spacecraft-assembly facility, whose spores are gamma-radiation resistant. Int J Syst Evol Microbiol 53:165–172 [View Article][PubMed]
    [Google Scholar]
23. Wayne L. G. 1988; International Committee on Systematic Bacteriology: announcement of the report of the ad hoc Committee on Reconciliation of Approaches to Bacterial Systematics. Zentralbl Bakteriol Mikrobiol Hyg [A] 268:433–434[PubMed]
    [Google Scholar]