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Volume 63, Issue Pt_9

gen. nov., sp. nov., a novel bacterium of the family isolated from an agricultural soil, and emended description of the genus Free

Abstract

A novel Gram-reaction-negative, yellow-pigmented, aerobic, non-motile and rod-shaped bacterium designated strain CC-YHH031 was isolated from an agricultural soil collected at Chiayi County, Taiwan. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain CC-YHH031 formed a discrete monophyletic lineage in the family , sharing high pairwise sequence similarity of 93.5–95.2 and 94.8 % with species of the genus (94.9 % similarity to the type strain of the type species) and GPTSA 20, respectively. The genomic DNA G+C content of strain CC-YHH031 was 68.6±0.7 mol% and the predominant respiratory quinone was ubiquinone Q-8. Spermidine was the principal polyamine, with minor amounts of putrescine. Major fatty acids (>5 % of total fatty acids) were iso-C, iso-C, Cω7 and/or Cω6 (summed feature 3), iso-Cω9, iso-C, iso-C and iso-C 3-OH. The polar lipid profile of strain CC-YHH031 included phosphatidylethanolamine, phosphatidylmonomethylethanolamine, diphosphatidylglycerol, phosphatidylglycerol, two unidentified aminophospholipids (APL1–2) and four unidentified phospholipids (PL1–4). Strain CC-YHH031 was distinguished particularly from the type species of the genus () by the presence of major amounts of iso-C and summed feature 3 and minor amounts of iso-C and by the complete absence of anteiso-C, the presence of PL1–3 and APL1–2, the absence of APL3 and the presence of putrescine in the former. On the basis of distinguishing genotypic and phenotypic evidence, strain CC-YHH031 is proposed to represent a novel genus and species within the family , for which the name gen. nov., sp. nov. is proposed. The type strain of is CC-YHH031 ( = BCRC 80273 = DSM 24163).

  • Published Online:
Funding
This study was supported by the:
  • National Science Council
  • Council of Agriculture, Executive Yuan
  • Ministry of Education, Taiwan, Republic of China (ROC)
© 2013 IUMS

Erratum

An erratum has been published for this content:
Corrigendum: gen. nov., sp. nov., a novel bacterium of the family isolated from an agricultural soil, and emended description of the genus
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2013-09-01
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Chiayiivirga flava gen. nov., sp. nov., a novel bacterium of the family Xanthomonadaceae isolated from an agricultural soil, and emended description of the genus Dokdonella
Int J Syst Evol Microbiol 63, 3293 (2013); https://doi.org/10.1099/ijs.0.048579-0
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