1887

Abstract

Abstract

We detected distinct taxonomic relationships among the true species, , all species, the type strain of , and members of Centers for Disease Control groups EF-4 and M-5. All these taxa constitute one large separate cluster having high levels of ribosomal ribonucleic acid cistron similarity (thermal dénaturation temperature range, 74 to 81°C) in ribosomal ribonucleic acid superfamily III. There are at least four subbranches. We found high deoxyribonucleic acid (DNA)-DNA homology values between and some other true species and within the following species: , and All of the members of this large cluster have genome base compositions in the range from 42.8 to 57.7 mol% guanine plus cytosine. The molecular complexities of the genomic DNAs are 2.2 x I0 to 2.7 × 10 for and species and 1.4 × 10 to 1.8 × 10 for the other members of this large cluster. We formally propose that this large cluster represents the emended family containing the following genera and groups: (not the generically misnamed (not some misnamed strains), and Centers for Disease Control groups EF-4 and M-5. The genera and subgenera , the false neisseriae, and should be removed from the , as they belong to superfamilies I and II.

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/00207713-39-2-185
1989-04-01
2024-04-18
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/39/2/ijs-39-2-185.html?itemId=/content/journal/ijsem/10.1099/00207713-39-2-185&mimeType=html&fmt=ahah

References

  1. Bøvre K. 1980; Progress in classification and identification of Neisseriaceae based on genetic affinity. 55–72 Goodfellow M., Board R. G. Microbiological classification and identification Academic Press, Inc. (London), Ltd.; London:
    [Google Scholar]
  2. Bøvre K. 1984; Family VIII. Neisseriaceae Prévot 1933, 119AL . 288–309 Krieg N. R., Holt J. G. Bergey’s manual of systematic bacteriology 1 The Williams & Wilkins Co.; Baltimore:
    [Google Scholar]
  3. Bøvre K., Frøholm L. O., Henriksen S. D., Holten E. 1977; Relationship of Neisseria elongata subsp. glycolytica to other members of the family Neisseriaceae. Acta Pathol. Microbiol. Scand. Sect. B 85:18–26
    [Google Scholar]
  4. Clark W. A., Hollis D. G., Weaver R. E., Riley P. 1984; Identification of unusual pathogenic Gram-negative aerobic and facultatively anaerobic bacteria. 144–147 Centers for Disease Control; Atlanta:
    [Google Scholar]
  5. Coykendall A. L., Kaczmarek F. S. 1980; DNA homologies among Eikenella corrodens strains. J. Periodontal Res. 15:615–620
    [Google Scholar]
  6. Dees S. B., Powell J., Moss C. W., Hollis D. G., Weaver R. E. 1981; Cellular fatty acid composition of organisms frequently associated with human infections resulting from dog bites: Pasteurella multocida and groups EF-4, Ilj, M-5, and DF-2. J. Clin. Microbiol. 14:612–616
    [Google Scholar]
  7. De Ley J. 1970; Reexamination of the association between melting point, buoyant density, and chemical base composition of deoxyribonucleic acid. J. Bacteriol. 101:738–754
    [Google Scholar]
  8. De Ley J. 1978 Modern methods in bacterial taxonomy: evaluation, application, prospects. 347–357Proceedings of the 4th International Conference on Plant Pathogenic Bacteria, Angers 1Gibert-Clarey, Tours, France
    [Google Scholar]
  9. De Ley J., Cattoir H., Reynaerts A. 1970; The quantitative measurement of DNA hybridization from renaturation rates. Eur. J. Biochem. 12:133–142
    [Google Scholar]
  10. De Ley J., De Smedt J. 1975; Improvements of the membrane filter method for DNA:rRNA hybridization. Antonie van Leeuwenhoek J. Microbiol. Serol. 41:287–308
    [Google Scholar]
  11. De Ley J., Segers P., Gillis M. 1978; Intra- and intergeneric similarities of Chromobacterium and Janthinobacterium ribosomal ribonucleic acid cistrons. Int. J. Syst. Bacteriol. 28:154–168
    [Google Scholar]
  12. De Ley J., Segers P., Kersters K., Mannheim W., Lievens A. 1986; Intra- and intergeneric similarities of the Bordetella ribosomal ribonucleic acid cistrons: proposal for a new family, Alcaligenaceae. Int. J. Syst. Bacteriol. 36:405–414
    [Google Scholar]
  13. De Ley J., Van Muylem J. 1963; Some applications of deoxyribonucleic acid base composition in bacterial taxonomy. Antonie van Leeuwenhoek J. Microbiol. Serol. 29:344–358
    [Google Scholar]
  14. De Smedt J., Bauwens M., Tytgat R., De Ley J. 1980; Intra- and intergeneric similarities of ribosomal ribonucleic acid cistrons of free-living nitrogen-fixing bacteria. Int. J. Syst. Bacteriol. 30:106–122
    [Google Scholar]
  15. De Vos P., De Ley J. 1983; Intra- and intergeneric similarities of Pseudomonas and Xanthomonas ribosomal ribonucleic acid cistrons. Int. J. Syst. Bacteriol. 33:487–509
    [Google Scholar]
  16. De Vos P., Goor M., Gillis M., De Ley J. 1985; Ribosomal ribonucleic acid cistron similarities of phytopathogenic Pseudomonas species. Int. J. Syst. Bacteriol. 35:169–184
    [Google Scholar]
  17. Edwards R., Feltham R. K. A. 1983; Taxonomic implications of the cellular fatty acid content of the Legionellaceae and possibly related species. FEMS Microbiol. Lett. 17:251–255
    [Google Scholar]
  18. Elwell L. P., Falkow S. 1977; Plasmids of the genus Neisseria. 137–154 Roberts R. B. The gonococcus John Wiley & Sons, Inc.; New York:
    [Google Scholar]
  19. Falsen E. 1988; Catalogue of strains CCUG, Culture Collection. , 5th ed.. University of Göteborg, Göteborg; Sweden:
    [Google Scholar]
  20. Gillis M., De Ley J. 1975; Determination of the molecular complexity of double-stranded phage genome DNA from initial renaturation rates. The effect of DNA base composition. J. Mol. Biol. 98:447–564
    [Google Scholar]
  21. Gillis M., De Ley J. 1980; Intra- and intergeneric similarities of the ribosomal ribonucleic acid cistrons of Acetobacter and Gluconobacter. Int. J. Syst. Bacteriol. 30:7–27
    [Google Scholar]
  22. Goldstein E. J. C., Gombert M. E. 1983; Eikenella corrodens: a new perspective. 1–43 Bottone E. J. Unusual microorganisms. Gram-negative fastidious species Marcel Dekker, Inc.; New York:
    [Google Scholar]
  23. Guibourdenche M., Popoff M. Y., Riou J. Y. 1986; Deoxyribonucleic acid relatedness among Neisseria gonorrhoeae, N. meningitidis, N. lactamica, N. cinerea and “Neisseria polysaccharea.”. Ann. Microbiol. (Paris) 137B:177–185
    [Google Scholar]
  24. Haug R. H., Henriksen S. D. 1969; The serology of Moraxella kingii. Acta Pathol. Microbiol. Scand. 75:641–647
    [Google Scholar]
  25. Henriksen S. D. 1969; Designation of the type strain of Bacteroides corrodens Eiken 1958. Int. J. Syst. Bacteriol. 19:375–376
    [Google Scholar]
  26. Henriksen S. D. 1969; Corroding bacteria from the respiratory tract. II. Bacteroides corrodens. Acta Pathol. Microbiol. Scand. 75:91–96
    [Google Scholar]
  27. Hoke C., Vedros N. A. 1982; Taxonomy of the neisseriae: deoxyribonucleic acid base composition, interspecific transformation, and deoxyribonucleic acid hybridization. Int. J. Syst. Bacteriol. 32:57–66
    [Google Scholar]
  28. Holmes B., Ahmed M. S. 1981; Group EF-4: a Pasteurella-like organism. 161–174 Kilian M., Frederiksen W., Biberstein E. L. Haemophilus, Pasteurella and Actinobacillus Academic Press, Inc. (London), Ltd.; London:
    [Google Scholar]
  29. Hylemon P. B., Wells J. S., Krieg N. R., Jannasch H. W. 1973; The genus Spirillum: a taxonomic study. Int. J. Syst. Bacteriol. 23:340–380
    [Google Scholar]
  30. Jackson F. L., Goodman Y. E. 1972; Transfer of the facultatively anaerobic organism Bacteroides corrodens Eiken to a new genus, Eikenella. Int. J. Syst. Bacteriol. 22:73–77
    [Google Scholar]
  31. Jackson F. L., Goodman Y. 1984; Genus Eikenella Jackson and Goodman 1972, 74AL . 591–597 Krieg R., Holt J. G. Bergey’s manual of systematic bacteriology 1 The Williams & Wilkins Co.; Baltimore:
    [Google Scholar]
  32. Jantzen E., Bryn K., Bergan T., Bøvre K. 1974; Gas chromatography of bacterial whole cell methanolysates. V. Fatty acid composition of Neisseriae and Moraxellae.. Acta Pathol. Microbiol. Scand. Sect. B 82:767–779
    [Google Scholar]
  33. Jantzen E., Bryn K., Hagen N., Bergan T., Bøvre K. 1978; Fatty acids and monosaccharides of Neisseriaceae in relation to established taxonomy. Nat. Inst. Public Health Ann. (Norway) 1:59–71
    [Google Scholar]
  34. Jantzen E., Kval heim O. M., Hauge T. A., Hagen N., Bøvre K. 1987; Grouping of bacteria by simca pattern recognition on gas chromatographic lipid data: patterns among Moraxella and rod-shaped Neisseria. Syst. Appl. Microbiol. 9:142–150
    [Google Scholar]
  35. Jenkins C. L., Kuhn D. A., Daly K. R. 1977; Fatty acid composition of Simonsiella strains. Arch. Microbiol. 113:209–213
    [Google Scholar]
  36. Juni E., Heym G. A. 1986; Psychrobacter immobilis gen. nov., sp. nov.: genospecies composed of gram-negative, aerobic, oxidase-positive coccobacilli. Int. J. Syst. Bacteriol. 36:388–391
    [Google Scholar]
  37. Kingsbury D. T. 1967; Deoxyribonucleic acid homologies among species of the genus Neisseria. J. Bacteriol. 94:870–874
    [Google Scholar]
  38. Kuhn D. A. 1981; The genera Simonsiella and Alysiella,. 390–399 Starr M. P., Stolp H., Triiper H. G., Balows A., Schlegel H. G. The prokaryotes 1 Springer-Verlag; Berlin:
    [Google Scholar]
  39. Kuhn D. A., Gregory D. A., Buchanan G. E. Jr., Nyby M. D., Daly K. R. 1978; Isolation, characterization, and numerical taxonomy of Simonsiella strains from the oral cavities of cats, dogs, sheep, and humans. Arch. Microbiol. 118:235–241
    [Google Scholar]
  40. Marmur J. A. 1961; A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J. Mol. Biol. 3:208–218
    [Google Scholar]
  41. Moss C. W., Wallace P. L., Hollis D. G., Weaver R. E. 1988; Cultural and chemical characterization of CDC groups EO-2, M-5, and M-6, Moraxella (Moraxella) species, Oligella urethralis, Acinetobacter species, and Psychrobacter immobilis. J. Clin. Microbiol. 26:484–492
    [Google Scholar]
  42. Prefontaine G., Jackson F. L. 1972; Cellular fatty acid profiles as an aid to the classification of “corroding bacilli” and certain other bacteria. Int. J. Syst. Bacteriol. 22:210–217
    [Google Scholar]
  43. Reichenbach H. 1981; Taxonomy of the gliding bacteria. Annu. Rev. Microbiol. 35:339–364
    [Google Scholar]
  44. Richards G. M. 1974; Modification of the diphenylamine reaction giving increased sensitivity and simplicity in the estimation of DNA. Anal. Biochem. 57:369–376
    [Google Scholar]
  45. Riou J. Y., Guibourdenche M. 1987; Neisseria polysaccharea sp. nov. Int. J. Syst. Bacteriol. 37:163–165
    [Google Scholar]
  46. Riou J. Y., Guibourdenche M., Popoff M. Y. 1983; A new taxon in the genus Neisseria. Ann. Microbiol. (Paris) 134B:257–267
    [Google Scholar]
  47. Rossau R., Kersters K., Falsen E., Jantzen E., Segers P., Union A., Nehls L., De Ley J. 1987; Oligella, a new genus including Oligella urethralis comb. nov. (formerly Moraxella urethralis) and Oligella ureolytica sp. nov. (formerly CDC group IVe): relationship to Taylorella equigenitalis and related taxa. Int. J. Syst. Bacteriol. 37:198–210
    [Google Scholar]
  48. Rossau R., Van Landschoot A., Mannheim W., De Ley J. 1986; Inter- and intrageneric similarities of ribosomal ribonucleic acid cistrons of the Neisseriaceae. Int. J. Syst. Bacteriol. 36:323–332
    [Google Scholar]
  49. Rubin J. S., Granato P. A., Wasilauskas B. L. 1985; Glucose-nonfermenting gram-negative bacteria. 330–349 Lennette E. H., Balows A., Hausier W. J. Jr., Shadomy H. J. Manual of clinical microbiology, 4th ed.. American Society for Microbiology; Washington, D.C.:
    [Google Scholar]
  50. Snell J. J. S. 1984; Kingella Henriksen and Bøvre 1976, 449AL . 307–309 Krieg N. R., Holt J. G. Bergey’s manual of systematic bacteriology 1 The Williams & Wilkins Co.; Baltimore:
    [Google Scholar]
  51. Snell J. J. S., Lapage S. P. 1976; Transfer of some saccharolytic Moraxella species to Kingella Henriksen and Bøvre 1976, with descriptions of Kingella indologenes sp. nov. and Kingella denitrificans sp. nov. Int. J. Syst. Bacteriol. 26:451–458
    [Google Scholar]
  52. Stackebrandt E. 1986; Das hierarchische System der Eubakterien: Problem und Lösungsansätze. Forum Mikrobiol. 9:255–260
    [Google Scholar]
  53. Van Landschoot A., Rossau R., De Ley J. 1986; Intra- and intergeneric similarities of the ribosomal ribonucleic acid cistrons of Acinetobacter. Int. J. Syst. Bacteriol. 36:150–160
    [Google Scholar]
  54. Vedros N. A. 1984; Neisseria Trevisan 1885, 105AL . 290–296 Krieg N. R., Holt J. G. Bergey’s manual of systematic bacteriology 1 The Williams & Wilkins Co.; Baltimore:
    [Google Scholar]
  55. Vedros N. A., Hoke C., Chun P. 1983; Neisseria macacae sp. nov., a new Neisseria species isolated from the oropharynges of rhesus monkeys (Macaca mulatto). Int. J. Syst. Bacteriol. 33:515–520
    [Google Scholar]
  56. Weaver R. E., Hollis D. G., Bottone E. J. 1985; Gramnegative fermentative bacteria and Francisella tularensis,. 309–329 Lennette E. H., Balows A., Hausier W. J. Jr., Shadomy H. J. Manual of clinical microbiology, 4th ed.. American Society for Microbiology; Washington, D.C.:
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/00207713-39-2-185
Loading
/content/journal/ijsem/10.1099/00207713-39-2-185
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error