Use of 16S rRNA Analysis To Investigate Phylogeny of Methylotrophic Bacteria

References

1. Alvarez-Cohen L., McCarty P. L., Boulygina E., Hanson R. S., Brusseau G. A., Tsien H. C. 1992; Characterization of a methane-utilizing bacterium from a bacterial consortium that rapidly degrades trichloroethylene and chloroform. Appl. Environ. Microbiol. 58:1886–1893
   [Google Scholar]
2. Anthony C. 1982 The biochemistry of methylotrophs. Academic Press, Inc; London:
   [Google Scholar]
3. Brusseau G. A., Tsien H. C., Hanson R. S., Wackett L. P. 1990; Optimization of trichloroethylene oxidation by methanotrophs and the use of a colorimetric assay to detect soluble methane monooxygenase activity. Biodegradation 1:19–29
   [Google Scholar]
4. Burrows K. J. A. Cornish, Scott D., Higgins I. J. 1984; Substrate specificities of the soluble and particulate methane monooxygenases of Methylosinus trichosporium OB3b. J. Gen. Microbiol. 103:3327–3333
   [Google Scholar]
5. Galchenko V. F., Andreen L. V., Trotsenko Y. A. 1986 Taxonomy and identification of obligate methanotrophic bacteria. Academic Press; USSR Academy of Science, Puschino, Russia:
   [Google Scholar]
6. Govorukhina N. L, Kletsova L. V., Tsygankov Y. D., Trotsenko Y. A., Netrusov A. I. 1987; Characteristics of a new obligate methylotroph. Mikrobiologiya 56:673–677 In Russian.
   [Google Scholar]
7. Hanson R. S., Netrusov A. I., Tsuji K・. 1991 The obligate methanotrophic bacteria Methylococcus, Methylomonas₉ and Methylosinus. 2350–2364 Balows A., Truper H. G., Dworkin M., Harder W., Schliefer K. H.ed The procaryotes 3 Springer-Verlag; New York:
   [Google Scholar]
8. Higgins I. J., Best D. J., Hammond R. C., Scott D. 1981; Methane-oxidizing microorganisms. Microbiol. Rev. 45:556–590
   [Google Scholar]
9. Hirano S.University of Wisconsin 1992 Personal communication
10. Oldenhuis R. L. J., Vink M., Janssen D. B., Witholt B. 1989; Degradation of chlorinated aliphatic hydrocarbons by Methylosinus trichosporium OB3b expressing soluble methane monooxygenase. Appl. Environ, Microbiol. 55:2819–2826
    [Google Scholar]
11. Romanovskaya V. A., Malashenko Y. R., Bogachenko Z. N. 1978; Corrected diagnosis of the genera and species of methane-utilizing bacteria. Mikrobiologiya 47:120–129 In Russian.
    [Google Scholar]
12. Scholtz RB, Wackett L. P., Egli C., Cook A. M., Leisinger T. 1988; Dichloromethane dehalogenase with improved catalytic activity isolated from a fast-growing dichloromethaneutilizing bacterium. J. Bacteriol. 170:5698–5704
    [Google Scholar]
13. Stackebrandt E., Murray R. G. E., Truper H. G. 1988; Proteobacteria classis nov., a name for the phylogenetic taxon that includes the purple bacteria and their relatives.”. Int. J. Syst. Bacteriol. 38:321–325
    [Google Scholar]
14. Stirling D. L., Colby J., Dalton H. 1979; A comparison of the substrate and electron-donor specificities of the methane monooxygenases from three strains of methane-oxidizing bacteria. Biochem. J. 177:361–364
    [Google Scholar]
15. Strand S. E., Lidstrom M. E. 1984; Characterization of a new marine methylotroph. FEMS Microbiol. Lett. 21:247–251
    [Google Scholar]
16. Topp E., Hanson R. S. 1991 Metabolism of radiatively important trace gases by methane-oxidizing bacteria. 71–90 Rogers J. E., Whitman W. B.ed Microbial production and consumption of greenhouse gases: methane, nitrogen oxides, and halomethanes American Society for Microbiology; Washington, D.C:
    [Google Scholar]
17. Tsien H. C., Bratina B. J., Tsuji K., Hanson R. S. 1990; Use of oligonucleotide signature probes for identification of physiological groups of methylotrophic bacteria. Appl. Environ. Microbiol. 56:2858–2865
    [Google Scholar]
18. Tsien H. C., Brusseau G. A., Hanson R. S., Wackett L. P. 1989; Biodegradation of trichloroethylene by Methylosinus trichosporium OB3b. Appl. Environ. Microbiol. 55:3155–3161
    [Google Scholar]
19. Tsien H. C., Hanson R. S. 1992; Soluble methane monooxygenase component B gene probe for identification of methanotrophs that rapidly degrade trichloroethylene, Appl. Environ. Microbiol. 58:953–960
    [Google Scholar]
20. Tsuji K. H., Tsien C., Hanson R. S., DePalma S. R., Scholtz R., LaRoche S. 1990; 16S ribosomal RNA sequence analysis for determination of phylogenetic relationship among methylotrophs. J. Gen. Microbiol. 136:1–10
    [Google Scholar]
21. Whittenbury R., Dalton H. 1983 The obligate methaneoxidizing bacteria and their biotechnological potential. 439–460 Hollaender A., Laskin A. I., Rogers P.ed Basic biology of new developments in biotechnology Plenum Press; New York:
    [Google Scholar]
22. Whittenbury R., Krieg N. R. 1984 Methylococcaceae fam, nov.. 256–261 Krieg N. R., Holt J. G.ed Bergey’s manual of determinative bacteriology 1 The Williams & Wilkins Co.; Baltimore:
    [Google Scholar]
23. Woese C. R. 1987; Bacterial evolution. Microbiol. Rev. 51:221–271
    [Google Scholar]
24. Yordy J. R., Weaver T. L. 1977; Methylobacillus: a new genus of obligately methylotrophic bacteria. Int. J. Syst. Bacterio1. 27:247–255
    [Google Scholar]
25. Zatman L. 1981 A search for patterns in methylotrophic pathways. 42–54 Dalton H.ed Microbial growth on C₁ compounds Heyden; London:
    [Google Scholar]