Burkholderia caribensis sp. nov., an exopolysaccharide-producing bacterium isolated from vertisol microaggregates in Martinique

References

1. Anderson R. D., Bao C.-Y., Minnick D. T., Veigel M., Sedwick W. D. 1992; Optimization of double-stranded DNA sequencing for polymerase chain reaction products. USB Edit Comment 19:39–4057–58
   [Google Scholar]
2. Azegami K., Nishiyama K., Watanabe Y., Kadota I., Ophuchi A., Fukazawa C. 1987; Pseudomonas plantarii sp. nov., the causal agent of rice seedling blight. Int J Syst Bacteriol 37:144–152
   [Google Scholar]
3. Ballard R. W., Palleroni N. J., Stanier R. Y., Mandel M. 1970; Taxonomy of aerobic pseudomonads Pseudomonas cepacia P marginata P alliicola and P caryophylli. J Gen Microbiol 60:199–214
   [Google Scholar]
4. Bell S. C., Turner J. M. 1973; Iodinin biosynthesis by a pseudomonad. Biochem Soc Trans 1:751–753
   [Google Scholar]
5. Brenner D. J., McWorter A. C., Leete Knutson J. K., Steigerwalt A. G. 1982; Escherichia vulneris a new species of Enterobacteriaceae associated with human wounds. J Clin Microbiol 15:1133–1140
   [Google Scholar]
6. Brett P. J., DeShazer D., Woods D. E. 1997; Characterization of Burkholderia pseudomallei and Burkholderia pseudomallei-like strains. Epidemiol Infect 118:137–148
   [Google Scholar]
7. Brett P. J., DeShazer D., Woods D. E. 1998; Burkholderia thailandensis sp. nov., a Burkholderia pseudomallei-like species. Int J Syst Bacteriol 48:317–320
   [Google Scholar]
8. Crosa J. M., Brenner D. J., Falkow S. 1973; Use of a single strand-specific nuclease for analysis of bacterial and plasmid deoxyribonucleic acid homo- and heteroduplexes. J Bacteriol 115:904–911
   [Google Scholar]
9. De Vos P., Goor M., Gillis M., De Ley J. 1985; Ribosomal ribonucleic acid cistron similarities of phytopathogenic Pseudomonas species. Int J Syst Bacteriol 35:169–184
   [Google Scholar]
10. Gillis M., Tran Van V., Bardin R., Goor M., Hebbar P., Willems A., Sergers P., Kersters K., Heulin T., Fernandez M. 1995; Polyphasic taxonomy in the genus Burkholderia leading to an emended description of the genus and proposition of Burkholderia vietnamiensis sp. nov. for N₂-fixing isolates from rice in Vietnam. Int J Syst Bacteriol 45:274–289
    [Google Scholar]
11. Grimont P. A. D., Popoff M. Y., Grimont F., Coynault C., Lemelin M. 1980; Reproducibility and correlation study of three deoxynucleic acid hybridization procedure. Curr Microbiol 4:325–330
    [Google Scholar]
12. Hebbar K. P., Davey A. G., Dart P. J. 1992a; Rhizobacteria of maize antagonistic to Fusarium moniliforme, a soil-borne fungal pathogen : identification and isolation. Soil Biol Biochem 24:989–997
    [Google Scholar]
13. Hebbar K. P., Davey A. G., Merrin J., Dart P. J. 1992b; Pseudomonas cepacia, a potential suppresser of maize soil-borne diseases : seed inoculation and maize root colonization. Soil Biol Biochem 24:999–1007
    [Google Scholar]
14. Imanaka H., Kousaka M., Tamura G., Arima K. 1965; Studies on pyrrolnitrin, a new antibiotic. Taxonomy studies on pyrrolnitrin-producing strain. J Antibiot 18:205–206
    [Google Scholar]
15. Kabir M., Chotte J. L., Rahman M., Bally R., Jocteur-Monrozier L. 1994; Distribution of soil fractions and location of soil bacteria in a vertisol under cultivation and perennial grass. Plant Soil 163:243–255
    [Google Scholar]
16. Kersters K., Ludwig W., Vancanneyt M., De Vos P., Gillis M., Schleifer K.-H. 1996; Recent changes in the classification of the Pseudomonas: an overview. Syst Appl Microbiol 19:465–167
    [Google Scholar]
17. Lumsden R. D., Sasser M. 1986; Medium for the isolation of Pseudomonas cepacia biotype from soil and the bacterial biotype. US Patent no 4:588–584
    [Google Scholar]
18. Marmur J., Doty P. 1962; Determination of the base composition of deoxyribonucleic acid from its thermal dena-turation temperature. J Mol Biol 5:109–118
    [Google Scholar]
19. Migula W. 1894 Arbeiten aus dem Bacteriologischen Institut der Technischen Hochschule zu Karlsruhe 1:235–238
    [Google Scholar]
20. Mueller J. G., Devereux R., Santavy D. L., Lantz S. E., Willis S. G., 8i Pritchard P. H. 1997; Phylogenetic and physiological comparisons of PAH-degrading bacteria from geographically diverse soils. Antonie Leeuwenhoek 71:329–343
    [Google Scholar]
21. Owen R. J., Lapage S. P. 1976; The thermal denaturation of partly purified bacterial deoxyribonucleic acid and its taxonomic implications. J Appl Bacteriol 41:335–340
    [Google Scholar]
22. Palleroni N. J. 1984; Genus Pseudomonas Migula 1894 237^AL. In Berge’s Manual of Systematic Bacteriology 1141–199 Krieg N. R., Holt J. G. Baltimore: Williams & Wilkins;
    [Google Scholar]
23. Palleroni N. J. 1992; Present situation in the taxonomy of aerobic pseudomonads. In Pseudomonas : Molecular Biology and Biotechnology105–115 Gali E., Silver S., Wit B. Washington, DC: American Society for Microbiology;
    [Google Scholar]
24. Palleroni N. J., Kunisawa R., Contopoulou R., Doudoroff M. 1973; Nucleic acid homologies in the genus Pseudomonas. Int J Syst Bacteriol 23:333–339
    [Google Scholar]
25. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
26. Segers P., Vancanneyt M., Pot B., Torck U., Hoste B., Dewettinck D., Falsen E., Kersters K., De Vos P. 1994; Classification of Pseudomonas diminuta Leifson and Hugh 1954 and Pseudomonas vesicularis Büsing, Döll and Freytag 1953 in Brevundimonas gen. nov. as Brevundimonas diminuta comb. nov. and Brevundimonas vesicularis comb. nov., respectively. Int J Syst Bacteriol 44:499–510
    [Google Scholar]
27. Severini G. 1913; Una bacteriosi dell’Ixia maculata e del Gladiolus coluilli. Ann Bot (Rome) 11:413–424
    [Google Scholar]
28. Springael D., van Thor J., Goorissen H., Ryngaert A., De Baere R., Van Hauwe P., Commandeur L. C., Parsons J. R., De Wachter R., Mergeay M. 1996; RP4 : : Mu3A-mediated in vivo cloning and transfer of a chlorobiphenyl catabolic pathway. Microbiology 142:3283–3293
    [Google Scholar]
29. Stackebrandt E., 8. Goebel B. M. 1994; A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44:846–849
    [Google Scholar]
30. Stapp C. 1935; Contemporary understanding of bacterial plant diseases and their causal organisms. Bot Rev 1:405–418
    [Google Scholar]
31. Tisdall J. M. 1994; Possible role of soil microorganisms in aggregation in soils. Plant Soil 159:115–121
    [Google Scholar]
32. Urakami T., Ito-Yoshida C., Araki H., Kijima T., Suzuki K. I., Komagata K. 1994; Transfer of Pseudomonas plantarii and Pseudomonas glumae to Burkholderia as Burkholderia spp. and description of Burkholderia vandii sp. nov. Int J Syst Bacteriol 44:235–245
    [Google Scholar]
33. Vandamme P., Johannes A. G., Cox H. C., Berends W. 1960; On toxoflavin, the yellow poison of Pseudomonas cocovenenans. Recl Trav Chim Pays-Bas Belg 79:255–267
    [Google Scholar]
34. Vandamme P., Holmes B., Vancanneyt M. 8 other authors 1997; Occurrence of multiple genomovars of Burkholderia cepacia in cystic fibrosis patients and proposal of Burkholderia multivorans sp. nov. Int J Syst Bacteriol 47:1188–1200
    [Google Scholar]
35. Viallard V., Poirier I., Cournoyer B., Haurat J., Wiebkin S., Ophel-Keller K., Balandreau J. 1998; Burkholderia graminis sp. a novel species of rhizospheric Burkholderia species and reassessment of [Pseudomonas] phenazinium, [Pseudomonas] pyrrocinia and [Pseudomonas] glathei as Burkholderia. Int J Syst Bacteriol 48:549–563
    [Google Scholar]
36. Yabuuchi E., Yano I., Oyaizu H., Hashimoto Y., Ezaki T., Yamamoto H. 1990; Proposal of Sphingomonas paucimobilis gen. nov. and comb. nov., Sphingomonas parapaucimobilis sp. nov., Sphingomonas yanoikuyae sp. nov., Sphingomonas adhaesiva sp. nov., Sphingomonas capsulata comb. nov. and two genospecies of the genus Sphingomonas. Int J Syst Bacteriol 40:99–119
    [Google Scholar]
37. Yabuuchi E., Kosako Y., Oyaizu H., Yano I., Hotta H., Hashimoto Y., Ezaki T., Arakawa M. 1992; Proposal of Burkholderia gen. nov. and transfer of seven species of the genus Pseudomonas homology group II to the new genus, with the type species Burkholderia cepacia (Palleroni and Holmes 1981) comb. nov. Microbiol Immunol 36:1251–1275
    [Google Scholar]
38. Yabuuchi E., Kosako Y., Yano I., Hotta H., Nishiuchi Y. 1995; Transfer of two Burkholderia and an Alcaligenes species to Ralstonia pickettii (Ralston, Palleroni and Doudoroff 1973) comb. nov., Ralstonia solanacearum (Smith 1896) comb. nov. and Ralstonia eutropha Davis 1969 comb. nov. Microbiol Immunol 39:897–904
    [Google Scholar]
39. Yohalem D. S., Lorbeer J. W. 1994; Intraspecific metabolic diversity among strains of Burkholderia cepacia isolated from decayed onions, soils and the clinical environment. Antonie Leeuwenhoek 65:111–131
    [Google Scholar]
40. Zhao N. X., Qu C. F., Wang E. T., Chen W. X. 1995; Phylogenetic evidence for the transfer of Pseudomonas cocovenenans (van Damme et al 1960) to the genus Burkholderia as Burkholderia cocovenenans (van Damme et al 1960) comb. nov. Int J Syst Bacteriol 45:600–603
    [Google Scholar]
41. Zolg W., Ottow J. C. G. 1975; Pseudomonas glathei sp. nov. A new nitrogen scavenging rod isolated from acid lateritic relicts in Germany. Z Allg Mikrobiol 15:287–299
    [Google Scholar]