Plesiocystis pacifica gen. nov., sp. nov., a marine myxobacterium that contains dihydrogenated menaquinone, isolated from the Pacific coasts of Japan

References

1. Bouchotroch S., Quesada E., del Moral A., Llamas I., Béjar V. 2001; Halomonas maura sp. nov., a novel moderately halophilic, exopolysaccharide-producing bacterium. Int J Syst Evol Microbiol 51:1625–1632 [CrossRef]
   [Google Scholar]
2. Collins M. D. 1992; The genus Brevibacterium . In The Prokaryotes , 2nd edn. pp 1351–1354Edited by Balows A., Trüper H. G., Dworkin M., Harder W., Schleifer K.-H. Berlin: Springer-Verlag;
   [Google Scholar]
3. Collins M. D., Widdel F. 1986; Respiratory quinones of sulphate-reducing and sulphur-reducing bacteria: a systematic investigation. Syst Appl Microbiol 8:8–18 [CrossRef]
   [Google Scholar]
4. Dawid W. 2000; Biology and global distribution of myxobacteria in soils. FEMS Microbiol Rev 24:403–427 [CrossRef]
   [Google Scholar]
5. Felsenstein J. 1985; Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791 [CrossRef]
   [Google Scholar]
6. Fudou R., Jojima Y., Iizuka T., Yamanaka S. 2002; Haliangium ochraceum gen. nov., sp. nov. and Haliangium tepidum sp. Novel moderately halophilic myxobacteria isolated from coastal saline environments. J Gen Appl Microbiol 48:109–115 [CrossRef]
   [Google Scholar]
7. Hiraishi A. 1992; Direct automated sequencing of 16S rDNA amplified by polymerase chain reaction from bacterial cultures without DNA purification. Lett Appl Microbiol 15:210–213 [CrossRef]
   [Google Scholar]
8. Hiraishi A. 1999; Isoprenoid quinones as biomarkers of microbial populations in the environment. J Biosci Bioeng 88:449–460 [CrossRef]
   [Google Scholar]
9. Hiraishi A., Hoshino Y., Kitamura H. 1984; Isoprenoid quinone composition in the classification of Rhodospirillaceae . J Gen Appl Microbiol 30:197–210 [CrossRef]
   [Google Scholar]
10. Iizuka T., Jojima Y., Fudou R., Yamanaka S. 1998a; Isolation of myxobacteria from the marine environment. FEMS Microbiol Lett 169:317–322 [CrossRef]
    [Google Scholar]
11. Iizuka T., Yamanaka S., Nishiyama T., Hiraishi A. 1998b; Isolation and phylogenetic analysis of aerobic copiotrophic ultramicrobacteria from urban soil. J Gen Appl Microbiol 44:75–84 [CrossRef]
    [Google Scholar]
12. Kushner D. J. 1978; Life in high salt and solute concentrations: halophilic bacteria. In Microbial Life in Extreme Environments pp 318–346Edited by Kushner D. J. New York: Academic Press;
    [Google Scholar]
13. Lane D. J. 1991; 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics pp 115–175Edited by Stackebrandt E., Goodfellow M. Chichester: Wiley;
    [Google Scholar]
14. MacLeod R. A. 1965; The question of the existence of specific marine bacteria. Bacteriol Rev 29:9–23
    [Google Scholar]
15. McCurdy H. D. 1989; Order Myxococcales Tchan, Pochon and Prevot 1948, 398 (with contributions of E. R. Brockman, H. Reichenbach, and D. White). pp 2139–2170 In Bergey's Manual of Systematic Bacteriology vol 3Edited by Staley J. T., Bryant M. P., Pfennig N., Holt J. G. Baltimore: Williams & Wilkins;
    [Google Scholar]
16. Mesbah M., Premachandran U., Whitman W. B. 1989; Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39:159–167 [CrossRef]
    [Google Scholar]
17. Reichenbach H. 1970; Nannocystis exedens gen. nov., spec. nov., a new myxobacterium of the family Sorangiaceae . Arch Mikrobiol 70:119–138 [CrossRef]
    [Google Scholar]
18. Reichenbach H. 1989; Genus II. Nannocystis . In Bergey's Manual of Systematic Bacteriology vol 3 pp 2162–2166Edited by Staley J. T., Bryant M. P., Pfennig N., Holt J. G. Baltimore: Williams & Wilkins;
    [Google Scholar]
19. Reichenbach H. 1993; Biology of the myxobacteria: ecology and taxonomy. In Myxobacteria II pp 16–32Edited by Dworkin M., Kaiser D. Washington, DC: American Society for Microbiology;
    [Google Scholar]
20. Reichenbach H., Dworkin M. 1992; The myxobacteria. In The Prokaryotes , 2nd edn. pp 3416–3487Edited by Balows A., Trüper H. G., Dworkin M., Harder W., Schleifer K.-H. Berlin: Springer-Verlag;
    [Google Scholar]
21. Roper M. M., Marshall K. C. 1977; Lysis of Escherichia coli by a marine myxobacter. Microb Ecol 3:167–171 [CrossRef]
    [Google Scholar]
22. Russell N. J., Nichols D. S. 1999; Polyunsaturated fatty acids in marine bacteria – a dogma rewritten. Microbiology 145:767–779 [CrossRef]
    [Google Scholar]
23. Saito H., Miura K. 1963; Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72:619–629 [CrossRef]
    [Google Scholar]
24. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
25. Sakata T., Yoshikawa T. 2000; Detection methods for macromolecule decomposing bacteria. In Experimental Methods in Microbiology for Marine Environmental Assessment p 100Edited by Ishida Y., Sugita H. Tokyo: Kosei-sha-Kosei-kaku; in Japanese
    [Google Scholar]
26. Shimkets L., Woese C. R. 1992; A phylogenetic analysis of the myxobacteria: basis for their classification. Proc Natl Acad Sci U S A 89:9459–9463 [CrossRef]
    [Google Scholar]
27. Spröer C., Reichenbach H., Stackebrandt E. 1999; The correlation between morphological and phylogenetic classification of myxobacteria. Int J Syst Bacteriol 49:1255–1262 [CrossRef]
    [Google Scholar]
28. Thompson J. D., Higgins D. G., Gibson T. J. 1994; clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680 [CrossRef]
    [Google Scholar]
29. Yamamoto H., Ezura Y., Kimura T. 1982; Evaluation of biological agents affecting on the survival of Vibrio parahaemolyticus in seawater. Bull Jpn Soc Sci Fish 48:1433–1439 [CrossRef]
    [Google Scholar]
30. Yamanaka S., Fudo R., Kawaguchi A., Komagata K. 1988; Taxonomic significance of hydroxy fatty acids in myxobacteria with special reference to 2-hydoxy fatty acids in phospholipids. J Gen Appl Microbiol 33:247–265
    [Google Scholar]