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Abstract

Strain 20041 was isolated from sea-ice of the Canadian Basin (7 ° 23′ 14″ N 14 ° 06′ 55″ W). Phylogenetic analysis based on 16S rRNA gene homology showed that strain 20041 was related to members of the genus and had highest 16S rRNA gene sequence similarity with the type strain of . Cells were Gram-negative, rod-shaped, psychrophilic and motile. The temperature range for growth was 0–22 °C, with optimum growth occurring at 16–18 °C and at approximately pH 6.0–9.0. Strain 20041 had ubiquinone-9 as the major respiratory quinone and iso-C 2OH and/or C 7, C, C 9 and C 3OH as major fatty acids. The genomic DNA G+C content was 55.4 mol%. On the basis of the phenotypic characteristics, phylogenetic analysis and DNA–DNA relatedness data, strain 20041 is considered to represent a novel species, for which the name sp. nov. is proposed. The type strain is 20041 (=CGMCC 1.6499=JCM 14643).

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2008-06-01
2024-04-19
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References

  1. Antunes, A., França, L., Rainey, F. A., Huber, R., Nobre, M. F., Edwards, K. J. & da Costa, M. S.(2007).Marinobacter salsuginis sp. nov., isolated from the brine-seawater interface of the Shaban Deep, Red Sea. Int J Syst Evol Microbiol 57, 1035–1040.[CrossRef] [Google Scholar]
  2. De Ley, J., Cattoir, H. & Reynaerts, A.(1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133–142.[CrossRef] [Google Scholar]
  3. Dong, X.-Z. & Cai, M.-Y. (editors)(2001). Determination of biochemical properties. In Manual for the Systematic Identification of General Bacteria, pp. 370–398. Beijing: Science Press (in Chinese).
  4. Gauthier, M. J., Lafay, B., Christen, R., Fernandez, L., Acquaviva, M., Bonin, P. & Bertrand, J.-C.(1992).Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium. Int J Syst Bacteriol 42, 568–576.[CrossRef] [Google Scholar]
  5. Green, D. H., Bowman, J. P., Smith, E. A., Gutierrez, T. & Bolch, C. J. S.(2006).Marinobacter algicola sp. nov., isolated from laboratory cultures of paralytic shellfish toxin-producing dinoflagellates. Int J Syst Evol Microbiol 56, 523–527.[CrossRef] [Google Scholar]
  6. Gu, J., Cai, H., Yu, S.-L., Qu, R., Yin, B., Guo, Y.-F., Zhao, J.-Y. & Wu, X.-L.(2007).Marinobacter gudaonensis sp. nov., isolated from an oil-polluted saline soil in a Chinese oilfield. Int J Syst Evol Microbiol 57, 250–254.[CrossRef] [Google Scholar]
  7. Guo, B., Gu, J., Ye, Y.-G., Tang, Y.-Q., Kida, K. & Wu, X.-L.(2007).Marinobacter segnicrescens sp. nov., a moderate halophile isolated from benthic sediment of the South China Sea. Int J Syst Evol Microbiol 57, 1970–1974.[CrossRef] [Google Scholar]
  8. Huß, V. A. R., Festl, H. & Schleifer, K.-H.(1983). Studies on the spectrometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184–192.[CrossRef] [Google Scholar]
  9. Kim, B.-Y., Weon, H.-Y., Yoo, S.-H., Kim, J.-S., Kwon, S.-W., Stackebrandt, E. & Go, S.-J.(2006).Marinobacter koreensis sp. nov., isolated from sea sand in Korea. Int J Syst Evol Microbiol 56, 2653–2656.[CrossRef] [Google Scholar]
  10. Komagata, K. & Suzuki, K.(1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161–207. [Google Scholar]
  11. Kumar, S., Tamura, K. & Nei, M.(2004).mega3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform 5, 150–163.[CrossRef] [Google Scholar]
  12. Leifson, E.(1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183–1184. [Google Scholar]
  13. Liebgott, P.-P., Casalot, L., Paillard, S., Lorquin, J. & Labat, M.(2006).Marinobacter vinifirmus sp. nov., a moderately halophilic bacterium isolated from a wine-barrel-decalcification wastewater. Int J Syst Evol Microbiol 56, 2511–2516.[CrossRef] [Google Scholar]
  14. Romanenko, L. A., Schumann, P., Rohde, M., Zhukova, N. V., Mikhailov, V. V. & Stackebrandt, E.(2005).Marinobacter bryozoorum sp. nov. and Marinobacter sediminum sp. nov., novel bacteria from the marine environment. Int J Syst Evol Microbiol 55, 143–148.[CrossRef] [Google Scholar]
  15. Sambrook, J., Frisch, E. F. & Maniatis, T.(1989).Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
  16. Sasser, M.(1990).Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids. Technical Note 101. Newark, DE: MIDI.
  17. Shivaji, S., Gupta, P., Chaturvedi, P., Suresh, K. & Delille, D.(2005).Marinobacter maritimus sp. nov., a psychrotolerant strain isolated from sea water off the subantarctic Kerguelen islands. Int J Syst Evol Microbiol 55, 1453–1456.[CrossRef] [Google Scholar]
  18. Yoon, J.-H., Lee, M.-H., Kang, S.-J. & Oh, T.-K.(2007).Marinobacter salicampi sp. nov., isolated from a marine solar saltern in Korea. Int J Syst Evol Microbiol 57, 2102–2105.[CrossRef] [Google Scholar]
  19. Zhang, D.-C., Yu, Y., Chen, B., Wang, H.-X., Liu, H.-C., Dong, X.-Z. & Zhou, P.-J.(2006).Glaciecola psychrophila sp. nov., a novel psychrophilic bacterium isolated from the Arctic. Int J Syst Evol Microbiol 56, 2867–2869.[CrossRef] [Google Scholar]
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vol. , part 6, pp. 1463-1466

The fatty acid profiles of strain 20041 and recognized species. [PDF](43 KB)



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