Description of Acinetobacter populi sp. nov. isolated from symptomatic bark of Populus × euramericana canker

References

1. Baker G. C., Smith J. J., Cowan D. A. ( 2003;). Review and re-analysis of domain-specific 16S primers. J Microbiol Methods 55 541–555 [View Article] [PubMed] .
   [Google Scholar]
2. Cleenwerck I., Vandemeulebroecke K., Janssens D., Swings J. ( 2002;). Re-examination of the genus Acetobacter, with descriptions of Acetobacter cerevisiae sp. nov. and Acetobacter malorum sp. nov. Int J Syst Evol Microbiol 52 1551–1558 [PubMed].
   [Google Scholar]
3. Cruze J. A., Singer J. T., Finnerty W. R. ( 1979;). Conditions for quantitative transformation in Acinetobacter calcoaceticus . Curr Microbiol 3 129–132 [View Article].
   [Google Scholar]
4. Ezaki T., Hashimoto Y., Yabuuchi E. ( 1989;). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39 224–229 [View Article].
   [Google Scholar]
5. Krizova L., Maixnerova M., Sedo O., Nemec A. ( 2014;). Acinetobacter bohemicus sp. nov. widespread in natural soil and water ecosystems in the Czech Republic. Syst Appl Microbiol 37 467–473 [View Article] [PubMed] .
   [Google Scholar]
6. Krizova L., McGinnis J., Maixnerova M., Nemec M., Poirel L., Mingle L., Sedo O., Wolfgang W., Nemec A. ( 2015;). Acinetobacter variabilis sp. nov. (formerly DNA group 15 sensu Tjernberg & Ursing), isolated from humans and animals. Int J Syst Evol Microbiol 65 1395 [View Article] [PubMed] .
   [Google Scholar]
7. Lane D. J. ( 1991;). 16S/23S rRNA sequencing. . In Nucleic Acid Techniques in Bacterial Systematics, pp. 115–175. Edited by Stackebrandt E., Goodfellow M. Chichester: Wiley;.
   [Google Scholar]
8. Li Y., Piao C. G., Ma Y. C., He W., Wang H. M., Chang J. P., Guo L. M., Wang X. Z., Xie S. J., Guo M. W. ( 2013;). Acinetobacter puyangensis sp. nov., isolated from the healthy and diseased part of Populus ×  euramericana canker bark. Int J Syst Evol Microbiol 63 2963–2969 [View Article] [PubMed] .
   [Google Scholar]
9. Li Y., He W., Wang T., Piao C. G., Guo L. M., Chang J. P., Guo M. W., Xie S. J. ( 2014a;). Acinetobacter qingfengensis sp. nov., isolated from canker bark of Populus ×  euramericana . Int J Syst Evol Microbiol 64 1043–1050 [View Article] [PubMed] .
   [Google Scholar]
10. Li Y., He W., Ren F. J., Guo L. M., Chang J. P., Cleenwerck I., Ma Y. C., Wang H. M. ( 2014b;). A canker disease of Populus ×  euramericana in China caused by Lonsdalea quercina subsp. populi . Plant Dis 98 368–378 [View Article].
    [Google Scholar]
11. Marmur J. ( 1961;). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3 208–218 [View Article].
    [Google Scholar]
12. Marmur J., Doty P. ( 1962;). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5 109–118 [View Article] [PubMed] .
    [Google Scholar]
13. Nemec A., Musílek M., Maixnerová M., De Baere T., van der Reijden T.J.K., Vaneechoutte M., Dijkshoorn L. ( 2009;). Acinetobacter beijerinckii sp. nov. and Acinetobacter gyllenbergii sp. nov., haemolytic organisms isolated from humans. Int J Syst Evol Microbiol 59 118–124 [View Article] [PubMed] .
    [Google Scholar]
14. Nemec A., Krizova L., Maixnerova M., van der Reijden T. J., Deschaght P., Passet V., Vaneechoutte M., Brisse S., Dijkshoorn L. ( 2011;). Genotypic and phenotypic characterization of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex with the proposal of Acinetobacter pittii sp. nov. (formerly Acinetobacter genomic species 3) and Acinetobacter nosocomialis sp. nov. (formerly Acinetobacter genomic species 13TU). Res Microbiol 162 393–404 [View Article] [PubMed] .
    [Google Scholar]
15. Smet A., Cools P., Krizova L., Maixnerova M., Sedo O., Haesebrouck F., Kempf M., Nemec A., Vaneechoutte M. ( 2014;). Acinetobacter gandensis sp. nov. isolated from horse and cattle. Int J Syst Evol Microbiol 64 4007–4015 [View Article] [PubMed] .
    [Google Scholar]
16. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. ( 2011;). mega5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28 2731–2739 [View Article] [PubMed] .
    [Google Scholar]
17. Touchon M., Cury J., Yoon E. J., Krizova L., Cerqueira G. C., Murphy C., Feldgarden M., Wortman J., Clermont D., other authors. ( 2014;). The genomic diversification of the whole Acinetobacter genus: origins, mechanisms, and consequences. Genome Biol Evol 6 2866–2882 [View Article] [PubMed] .
    [Google Scholar]
18. Wayne L. G., Brenner D. J., Colwell R. R. & other authors ( 1987;). Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 297 463–464. [CrossRef]
    [Google Scholar]
19. Yamamoto S., Harayama S. ( 1995;). PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida strains. Appl Environ Microbiol 61 1104–1109 [PubMed].
    [Google Scholar]