- Home
- Publications
- International Journal of Systematic and Evolutionary Microbiology
- Volume 66, Issue 5
- Article

f Pseudoalteromonas aestuariivivens sp. nov., isolated from a tidal flat
- Authors: Sooyeon Park1 , Yong-Taek Jung1,2 , Doo-Sang Park3 , Jung-Hoon Yoon1
-
- VIEW AFFILIATIONS
-
1 1Department of Food Science and Biotechnology, Sungkyunkwan University,Jangan-gu, Suwon,South Korea 2 2University of Science and Technology (UST),113 Gwahak-ro, Yuseong-gu, Daejeon,South Korea 3 3Microbiological Resource Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB),PO Box 115, Yuseong, Daejeon,South Korea
- Correspondence Jung-Hoon Yoon [email protected]
- First Published Online: 01 May 2016, International Journal of Systematic and Evolutionary Microbiology 66: 2078-2083, doi: 10.1099/ijsem.0.000995
- Subject: NEW TAXA - Proteobacteria
- Cover date:




Pseudoalteromonas aestuariivivens sp. nov., isolated from a tidal flat, Page 1 of 1
< Previous page | Next page > /docserver/preview/fulltext/ijsem/66/5/2078_ijsem000995-1.gif
-
A Gram-stain-negative, aerobic, motile, rod-shaped or ovoid bacterial strain, designated DB-2T, was isolated from a tidal flat of the Yellow Sea in South Korea, and subjected to a taxonomic study using a polyphasic approach. Strain DB-2T grew optimally at 30 °C, at pH 7.0–8.0 and in the presence of 2.0–3.0 % (w/v) NaCl. Phylogenetic trees based on 16S rRNA gene sequences showed that strain DB-2T belonged to the genus Pseudoalteromonas. Strain DB-2T exhibited 16S rRNA gene sequence similarities of 97.17–97.36 % to the type strains of Pseudoalteromonas mariniglutinosa, Pseudoalteromonas spongiae and Pseudoalteromonas tetraodonis and of 93.79–96.99 % to the type strains of the other species of the genus Pseudoalteromonas. Strain DB-2T contained Q-8 as the predominant ubiquinone and C16 : 0, C18 : 1ω7c, summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c) and C12 : 0 3-OH as the major fatty acids. The major polar lipids detected in strain DB-2T were phosphatidylglycerol, phosphatidylethanolamine, two unidentified glycolipids, an unidentified phospholipid and an unidentified aminolipid. The DNA G+C content of strain DB-2T was 54.9 ± 0.2 mol% and mean DNA–DNA relatedness values with the type strains of P. mariniglutinosa, P. spongiae and P. tetraodonis were 10–17 %. Differential phenotypic properties, together with phylogenetic and genetic distinctiveness, revealed that strain DB-2T is separated from recognized species of the genus Pseudoalteromonas. On the basis of these data, strain DB-2T is considered to represent a novel species of the genus Pseudoalteromonas, for which the name Pseudoalteromonas aestuariivivens sp. nov. is proposed. The type strain is DB-2T ( = KCTC 42779T = CECT 8945T).
-
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain DB-2T is KT366926.
-
Two supplementary figures are available with the online Supplementary Material.
© 2016 IUMS | Published by the Microbiology Society
-
Barrow G. I., Feltham R. K. A..), ( 1993;). Cowan and Steel's Manual for the Identification of Medical Bacteria, 3rd edn.. Cambridge:: Cambridge University Press;. [CrossRef]
-
Bruns A., Rohde M., Berthe-Corti L.. ( 2001;). Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment. Int J Syst Evol Microbiol 51: 1997––2006 [CrossRef] [PubMed].
-
Embley T. M., Wait R.. ( 1994;). Structural lipids of eubacteria. . In Modern Microbial Methods. Chemical Methods in Prokaryotic Systematics, pp. 121––161. Edited by Goodfellow M., O'Donnell A. G.. Chichester: Wiley;.
-
Ezaki T., Hashimoto Y., Yabuuchi E.. ( 1989;). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39: 224––229 [CrossRef].
-
Gauthier G., Gauthier M., Christen R.. ( 1995;). Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations. Int J Syst Bacteriol 45: 755––761 [CrossRef] [PubMed].
-
Ivanova E. P., Romanenko L. A., Matté M. H., Matté G. R., Lysenko A. M., Simidu U., Kita-Tsukamoto K., Sawabe T., Vysotskii M. V., other authors. ( 2001;). Retrieval of the species Alteromonas tetraodonis Simidu et al. 1990 as Pseudoalteromonas tetraodonis comb. nov. and emendation of description. Int J Syst Evol Microbiol 51: 1071––1078 [CrossRef] [PubMed].
-
Ivanova E. P., Sawabe T., Lysenko A. M., Gorshkova N. M., Svetashev V. I., Nicolau D. V., Yumoto N., Taguchi T., Yoshikawa S., other authors. ( 2002;). Pseudoalteromonas ruthenica sp. nov., isolated from marine invertebrates. Int J Syst Evol Microbiol 52: 235––240 [CrossRef] [PubMed].
-
Komagata K., Suzuki K.. ( 1987;). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19: 161––207 [CrossRef].
-
Lányí B.. ( 1987;). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19: 1––67 [CrossRef].
-
Lau S.C.K., Tsoi M.M.Y., Li X., Dobretsov S., Plakhotnikova Y., Wong P.-K., Qian P.-Y.. ( 2005;). Pseudoalteromonas spongiae sp. nov., a novel member of the γ-Proteobacteria isolated from the sponge Mycale adhaerens in Hong Kong waters. Int J Syst Evol Microbiol 55: 1593––1596 [CrossRef] [PubMed].
-
Leifson E.. ( 1963;). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85: 1183––1184 [PubMed].
-
Matsuyama H., Sawazaki K., Minami H., Kasahara H., Horikawa K., Yumoto I.. ( 2014;). Pseudoalteromonas shioyasakiensis sp. nov., a marine polysaccharide-producing bacterium. Int J Syst Evol Microbiol 64: 101––106 [CrossRef] [PubMed].
-
Mikhailov V. V., Romanenko L. A., Ivanova E.. ( 2006;). The genus Alteromonas and related Proteobacteria. . In The Prokaryotes: a Handbook on the Biology of Bacteria, 3rd edn.vol. 6, pp. 597––645. Edited by Dworkin M., Falkow S., Rosenberg E., Schleifer K.-H., Stackebrandt E.. New York:: Springer;. [CrossRef]
-
Minnikin D. E., O'Donnell A. G., Goodfellow M., Alderson G., Athalye M., Schaal A., Parlett J. H.. ( 1984;). An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2: 233––241 [CrossRef].
-
Park S., Park D.-S., Bae K. S., Yoon J.-H.. ( 2014;). Phaeobacter aquaemixtae sp. nov., isolated from the junction between the ocean and a freshwater spring. Int J Syst Evol Microbiol 64: 1378––1383 [CrossRef] [PubMed].
-
Park S., Jung Y.-T., Kim S., Yoon J. H.. ( 2016;). [CrossRef] [PubMed] Marinobacterium aestuariivivens sp. nov., isolated from a tidal flat. Int J Syst Evol Microbiol 66:.
-
Parte A. C.. ( 2014;). LPSN–list of prokaryotic names with standing in nomenclature. Nucleic Acids Res 42: (D1), D613––D616 [CrossRef] [PubMed].
-
Romanenko L. A., Zhukova N. V., Lysenko A. M., Mikhailov V. V., Stackebrandt E.. ( 2003;). Assignment of ‘Alteromonas marinoglutinosa’ NCIMB 1770 to Pseudoalteromonas mariniglutinosa sp. nov., nom. rev., comb. nov. Int J Syst Evol Microbiol 53: 1105––1109 [CrossRef] [PubMed].
-
Sasser M.. ( 1990;). Identification of bacteria by gas chromatography of cellular fatty acids MIDI Technical Note 101. Newark, DE: MIDI Inc;.
-
Stackebrandt E., Goebel B. M.. ( 1994;). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44: 846––849 [CrossRef].
-
Tamaoka J., Komagata K.. ( 1984;). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25: 125––128 [CrossRef].
-
Wayne L. G., Brenner D. J., Colwell R. R., Grimont P.A.D., Kandler O., Krichevsky M. I., Moore L. H., Moore W.E.C., Murray R.G.E., other authors. ( 1987;). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37: 463––464 [CrossRef].
-
Yoon J.-H., Kim H., Kim S.-B., Kim H.-J., Kim W. Y., Lee S. T., Goodfellow M., Park Y.-H.. ( 1996;). Identification of Saccharomonospora strains by the use of genomic DNA fragments and rRNA gene probes. Int J Syst Bacteriol 46: 502––505 [CrossRef].
-
Yoon J.-H., Lee S. T., Park Y.-H.. ( 1998;). Inter- and intraspecific phylogenetic analysis of the genus Nocardioides and related taxa based on 16S rDNA sequences. Int J Syst Bacteriol 48: 187––194 [CrossRef] [PubMed].
-
Yoon J.-H., Kang K. H., Park Y.-H.. ( 2003;). Psychrobacter jeotgali sp. nov., isolated from jeotgal, a traditional Korean fermented seafood. Int J Syst Evol Microbiol 53: 449––454 [CrossRef] [PubMed].
-
Zhao C.-H., Luo J.-J., Gong T., Huang X.-L., Ye D.-Z., Luo Z.-H.. ( 2014;). Pseudoalteromonas xiamenensis sp. nov., a marine bacterium isolated from coastal surface seawater. Int J Syst Evol Microbiol 64: 444––448 [CrossRef] [PubMed].

Supplementary Data
Data loading....

Article metrics loading...

Full text loading...
Author and Article Information
-
This Journal
/content/journal/ijsem/10.1099/ijsem.0.000995dcterms_title,dcterms_subject,pub_serialTitlepub_serialIdent:journal/ijsem AND -contentType:BlogPost104 -
Other Society Journals
/content/journal/ijsem/10.1099/ijsem.0.000995dcterms_title,dcterms_subject-pub_serialIdent:journal/ijsem AND -contentType:BlogPost104 -
PubMed
-
Google Scholar
Figure data loading....