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- Volume 66, Issue 8
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f Micromonospora sediminis sp. nov., isolated from mangrove sediment
- Authors: Wongsakorn Phongsopitanun1 , Takuji Kudo2 , Moriya Ohkuma2 , Pattama Pittayakhajonwut3 , Khanit Suwanborirux4 , Somboon Tanasupawat1
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- VIEW AFFILIATIONS
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1 1 Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand 2 2 Japan Collection of Microorganisms, RIKEN BioResource Center, Tsukuba, Ibaraki 305-0074, Japan 3 3 National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Thailand Science Park, Pathumthani 12120, Thailand 4 4 Department of Pharmacognosy and Pharmaceutical Botany, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand
- Correspondence Somboon Tanasupawat [email protected]
- First Published Online: 01 August 2016, International Journal of Systematic and Evolutionary Microbiology 66: 3235-3240, doi: 10.1099/ijsem.0.001175
- Subject: New taxa - Actinobacteria
- Received:
- Accepted:
- Cover date:




Micromonospora sediminis sp. nov., isolated from mangrove sediment, Page 1 of 1
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The novel actinomycete, strain CH3-3T, was isolated from mangrove sediment collected from Chonburi Province, Thailand. On the basis of its spore morphology and chemotaxonomic characteristics, the strain belonged to the genus Micromonospora . It contained meso-diaminopimelic acid, glucose, mannose, xylose, ribose and rhamnose in the whole-cell hydrolysate, MK-10(H4), MK-10(H6) and MK-10(H8) as major menaquinones, and iso-C15 : 0, iso-C16 : 0 and iso-C17 : 0 as major cellular fatty acids. blast analysis of 16S rRNA gene sequences revealed that the strain showed highest similarity with Micromonospora palomenae NEAU-CX1T (98.97 %) and Micromonospora coxensis 2–30-b(28)T (98.97 %). Based on phylogenetic tree analysis of the 16S rRNA gene sequence, the strain formed a cluster with M. palomenae NEAU-CX1T, Micromonospora halophytica DSM 43171T, M. coxensis 2-30-b(28)T and Micromonospora purpureochromogenes DSM 43821T. On the basis of phenotypic differences and DNA–DNA relatedness evidence, strain CH3-3T could be clearly distinguished from the closely related species of the genus Micromonospora and represents a novel species of the genus Micromonospora for which the name Micromonospora sediminis sp. nov. is proposed. The type strain is CH3-3T (=JCM 18523T=PCU 350T=TISTR 2396T).
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The GenBank/EMBL/DDBJ accession numbers for the 16S rRNA gene and gyrB gene sequences of strain CH3-3T are AB889541 and LC125631, respectively.
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Two supplementary tables and two supplementary figures are available with the online Supplementary Material.
- Keyword(s): Micromonospora sp.nov., Micromonosporaceae, Micromonospora sediminis, Mangrove sediment, Novel actinomycete
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Abbreviations: DAP diaminopimelic acid DPG diphosphatidylglycerol PE phosphatidylethanolamine PG phosphatidylglycerol PI phosphatidylinositol
© 2016 IUMS | Published by the Microbiology Society
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