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- International Journal of Systematic and Evolutionary Microbiology
- Volume 66, Issue 9
- Article

f Description of Novosphingobium flavum sp. nov., isolated from soil
- Authors: Tuan Manh Nguyen1,2 , Seung-Woon Myung3 , Hyein Jang4 , Jaisoo Kim1
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- VIEW AFFILIATIONS
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1 1Department of Life Science, College of Natural Sciences, Kyonggi University, Suwon, Gyeonggi-Do 16227, Republic of Korea 2 2Thai Nguyen University of Agriculture and Forestry, Quyet Thang commune, Thai Nguyen city, Vietnam 3 3Department of Chemistry, College of Natural Sciences, Kyonggi University, Suwon, Gyeonggi-Do 16227, Republic of Korea 4 4Department of Oriental Medical and Herbal Cosmetic Sciences, Semyung University, Chungcheongbuk-Do 27136, Republic of Korea
- Correspondence Jaisoo Kim [email protected]
- First Published Online: 01 September 2016, International Journal of Systematic and Evolutionary Microbiology 66: 3642-3650, doi: 10.1099/ijsem.0.001242
- Subject: New taxa - Proteobacteria
- Received:
- Accepted:
- Cover date:




Description of Novosphingobium flavum sp. nov., isolated from soil, Page 1 of 1
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A novel yellow bacterial strain, designated UCM-28T, was isolated from forest soil in Gyeonggi-Do, South Korea. The isolated strain was Gram-stain-negative, aerobic, non-spore-forming, non-motile and rod-shaped, and grew at 10–37 °C, pH 5.5–9 and with 0–1 % NaCl. It could reduce nitrate to nitrite and hydrolyse aesculin. We determined the taxonomic position of strain UCM-28T; based on the 16S rRNA gene sequence, the strain belongs to the genus Novosphingobium . The bacterium showed the highest similarity to Novosphingobium piscinae SLH-16T (98.9 %), Novosphingobium rhizosphaerae JM-1T (97.7 %), Novosphingobium taihuense T3-B9T (97.2 %), Novosphingobium subterraneum DSM 12447T (97.1 %), Novosphingobium aromaticivorans DSM 12444T (97.1 %) and Novosphingobium capsulatum GIFU 11526T (96.7 %). Phylogenic trees also confirmed that strain UCM-28T is most closely related to Novosphingobium piscinae SLH-16T and others, and is positioned within the genus Novosphingobium . The DNA relatedness of strain UCM-28T with its references was in the range of 20.9–35.2 %. The polar lipid profile revealed diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, sphingoglycolipid, phosphatidylcholine, phosphatidylmonomethylethanolamine, six unidentified polar lipids and two unknown glycolipids. The major quinone was ubiquinone Q-10, and the major polyamine was spermidine. The DNA G+C content was 63.5 mol%. The major fatty acids included (>10 %) summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c) (46.3 %), summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c) (24.9 %) and C14 : 0 2-OH (11.8 %). Based on the phylogenetic and phenotypic data, strain UCM-28T should be classified within the genus Novosphingobium as a representative of a novel species, named Novosphingobium flavum sp. nov. The type strain is UCM-28T (=KACC 18571T=NBRC 111647T).
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The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain UCT-28T is KT750339.
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Three supplementary figures are available with the online Supplementary Material.
- Keyword(s): forest soil, Proteobacteria, taxonomy, Novosphingobium flavum sp. nov.
© 2016 IUMS | Published by the Microbiology Society
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