Citrobacter europaeus sp. nov., isolated from water and human faecal samples

References

1. Borenshtein D, Schauer D. The genus Citrobacter. In Dworkin M, Falkow S, Rosenberg E, Scheleifer KH, Stackebrandt E et al. (editors) The Prokaryotes New York: Springer; 2006 pp. 90–98 [CrossRef]
   [Google Scholar]
2. Engelkirk PG, Duben-Engelkirk PG. Laboratory diagnosis of infectious diseases: essentials of diagnostic microbiology. The Gram-Negative Bacilli: The Family Enterobacteriaceae Philadelphia: Lippincott Williams & Wilkins; 2008 pp 308
   [Google Scholar]
3. Ribeiro TG, Novais Â, Branquinho R, Machado E, Peixe L. Phylogeny and comparative Genomics unveil independent Diversification Trajectories of qnrB and genetic Platforms within particular Citrobacter Species. Antimicrob Agents Chemother 2015; 59:5951–5958 [View Article][PubMed]
   [Google Scholar]
4. Albaser A, Kazana E, Bennett MH, Cebeci F, Luang-In V et al. Discovery of a bacterial glycoside hydrolase family 3 (GH3) β-glucosidase with myrosinase activity from a Citrobacter strain isolated from soil. J Agric Food Chem 2016; 64:1520–1527 [View Article][PubMed]
   [Google Scholar]
5. Clermont D, Motreff L, Passet V, Fernandez JC, Bizet C et al. Multilocus sequence analysis of the genus Citrobacter and description of Citrobacter pasteurii sp. nov. Int J Syst Evol Microbiol 2015; 65:1486–1490 [View Article][PubMed]
   [Google Scholar]
6. Ko KS, Choi JY, Kim J, Park MK. Citrobacter bitternis sp. nov. isolated from bitterns. Curr Microbiol 2015; 70:894–897 [View Article][PubMed]
   [Google Scholar]
7. Brenner DJ, Grimont PA, Steigerwalt AG, Fanning GR, Ageron E et al. Classification of citrobacteria by DNA hybridization: designation of Citrobacter farmeri sp. nov., Citrobacter youngae sp. nov., Citrobacter braakii sp. nov., Citrobacter werkmanii sp. nov., Citrobacter sedlakii sp. nov., and three unnamed Citrobacter genomospecies. Int J Syst Bacteriol 1993; 43:645–658 [View Article][PubMed]
   [Google Scholar]
8. Frederiksen W. Genus X. Citrobacter Werkman and Gillen. In Brenner D, Krieg N, Staley J, Garrity G. (editor) Bergey's Manual of Systematic Bacteriology New York, USA: Springer; 2005 pp. 651–656
   [Google Scholar]
9. Delétoile A, Decré D, Courant S, Passet V, Audo J et al. Phylogeny and identification of Pantoea species and typing of Pantoea agglomerans strains by multilocus gene sequencing. J Clin Microbiol 2009; 47:300–310 [View Article][PubMed]
   [Google Scholar]
10. Warren JR, Farmer JJ, Dewhirst FE, Birkhead K, Zembower T et al. Outbreak of nosocomial infections due to extended-spectrum beta-lactamase-producing strains of enteric group 137, a new member of the family Enterobacteriaceae closely related to Citrobacter farmeri and Citrobacter amalonaticus. J Clin Microbiol 2000; 38:3946–3952[PubMed]
    [Google Scholar]
11. Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M et al. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol 2012; 19:455–477 [View Article][PubMed]
    [Google Scholar]
12. Richter M, Rosselló-Móra R. Shifting the genomic gold standard for the prokaryotic species definition. Proc Natl Acad Sci USA 2009; 106:19126–19131 [View Article][PubMed]
    [Google Scholar]
13. Guindon S, Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 2003; 52:696–704 [View Article][PubMed]
    [Google Scholar]
14. Naum M, Brown EW, Mason-Gamer RJ. Is 16S rDNA a reliable phylogenetic marker to characterize relationships below the family level in the Enterobacteriaceae?. J Mol Evol 2008; 66:630–642 [View Article][PubMed]
    [Google Scholar]