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f Siccirubricoccus deserti gen. nov., sp. nov., a proteobacterium isolated from a desert sample

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  • Authors: Zi-Wen Yang1​,† ,  Nimaichand Salam1​,† ,  Zheng-Shuang Hua1​,† ,  Bing-Bing Liu1​ ,  Ming-Xian Han1​ ,  Bao-Zhu Fang1​ ,  Dong Wang1​ ,  Min Xiao1​ ,  Wael N. Hozzein2​,3​ , Wen-Jun Li1​,4​
    • VIEW AFFILIATIONS
    • 1​ 1​State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, PR China 2​ 2​Bioproducts Research Chair, Zoology Department, College of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia 3​ 3​Botany and Microbiology Department, Faculty of Science, Beni-Suef University, Beni-Suef 62511, Egypt 4​ 4​Key Laboratory of Biogeography and Bioresource in Arid Land, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Ürümqi 830011, PR China
  • *Correspondence: Wael N. Hozzein [email protected], Wen-Jun Li [email protected]
  • First Published Online: 06 October 2017, International Journal of Systematic and Evolutionary Microbiology 67: 4862-4867, doi: 10.1099/ijsem.0.002397
  • Subject: New taxa - Proteobacteria
  • Received:
  • Accepted:
  • Cover date:
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  • Strain SYSU D8009 was isolated from a desert sample collected from Saudi Arabia. The taxonomic position of the isolate was investigated by a polyphasic approach. The novel isolate was Gram-stain-negative, non-motile, aerobic and non-spore-forming. It was able to grow at 4–45 °C and pH 4.0–8.0, and exhibited NaCl tolerance of up to 1.5 % (w/v). Strain SYSU D8009 shared the closest 16S rRNA gene sequence similarities with members of the family Acetobacteraceae , with a value of less than 96.0 %. In the phylogenetic dendrograms, the strain clustered with the genera Paracraurococcus , Craurococcus and Crenalkalicoccus within the family Acetobacteraceae but with a distinct lineage, thereby demonstrating that the strain should be classified within the family Acetobacteraceae . The respiratory ubiquinone was found to be Q-10. The polar lipids of the strain comprised diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and four unidentified aminolipids. The predominant cellular fatty acids were summed feature 8 (C1 8 : 1ω7c and/or C1 8 : 1ω6c) and C16 : 0. The genomic DNA G+C content of strain SYSU D8009 was determined to be 71.6 mol%. Based on the results of the phylogenetic analyses and differences in the physiological and biochemical characteristics, strain SYSU D8009 merits representation of a novel species of a new genus within the family Acetobacteraceae , for which the name Siccirubricoccus deserti gen. nov., sp. nov. is proposed. The type strain of Siccirubricoccus deserti sp. nov. is SYSU D8009 (=CGMCC 1.15936=KCTC 62088).

  • †

    These authors contributed equally to this work.

  • The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain SYSU D8009 is KY882041.

  • Five supplementary figures and one supplementary table are available with the online Supplementary Material.

© 2017 IUMS | Published by the Microbiology Society

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