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f Halomonas sediminicola sp. nov., a moderately halophilic bacterium isolated from a solar saltern sediment

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  • Authors: Jae-Chan Lee1​,2​ ,  Su-Jin Kim1​ , Kyung-Sook Whang1​,2​
    • VIEW AFFILIATIONS
    • 1​ 1​Department of Microbial & Nano Materials, Mokwon University, 88 Doanbuk-ro, Seo-gu, Daejeon 302-318, Republic of Korea 2​ 2​Institute of Microbial Ecology and Resources, Mokwon University, 88 Doanbuk-ro, Seo-gu, Daejeon 302-318, Republic of Korea
  • Correspondence Kyung-Sook Whang [email protected]
  • First Published Online: 01 October 2016, International Journal of Systematic and Evolutionary Microbiology 66: 3865-3872, doi: 10.1099/ijsem.0.001278
  • Subject: New taxa - Proteobacteria
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Halomonas sediminicola sp. nov., a moderately halophilic bacterium isolated from a solar saltern sediment, Page 1 of 1

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  • A Gram-stain-negative, moderately halophilic bacterium, designated strain CPS11, was isolated from the sediment of a solar pond located in Shinan, Korea. Strain CPS11 was a strictly aerobic, motile, straight rod-shaped bacterium that grew at pH 5.0–9.0 (optimum, pH 7.0–8.0), at 10–37 °C (optimum, 28 °C) and at salinities of 1–20 % (w/v) NaCl (optimum, 10 % NaCl). Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain CPS11 belonged to the genus Halomonas , with sequence similarity of 98.5–94.3 % to existing type strains, showing highest sequence similarity to Halomonas fontilapidosi 5CR (98.5 %), Halomonas ventosae Al12 (98.5 %), Halomonas campaniensis 5AG (98.2 %), Halomonas huangheensis BJGMM-B45 (98.0 %), Halomonas alimentaria YKJ-16 (98.0 %), Halomonas mongoliensis Z-7009 (97.8 %), Halomonas shengliensis SL014B-85 (97.5 %) and Halomonas cupida DSM 4740 (97.5 %). The predominant ubiquinone was Q-9. The major fatty acids were C19 : 0 cyclo ω8c, C16 : 1 ω7c and/or iso-C15 : 0 2-OH, C16 : 0, C17 : 0 cyclo, C12 : 0 3-OH and C18 : 1 ω7c. The polar lipids were phosphatidylglycerol, phosphatidylethanolamine, aminophospholipid, an unknown phospholipid and unknown lipids. The DNA G+C content of this novel isolate was 64.3 mol%. Levels of DNA–DNA relatedness between strain CPS11 and the type strains of ten other species of the genus ranged from 50 to 21 %. On the basis of the polyphasic analysis conducted in this study, strain CPS11 represents a novel species of the genus Halomonas , for which the name Halomonas sediminicola sp. nov. is proposed. The type strain is CPS11(=KACC 18262=NBRC 110636).

  • The GenBank/EMBL/DDBJ accession numbers for the 16S rRNA and 23S rRNA gene sequences of strain CPS11 are AB971837 and LC055730, respectively.

  • Five supplementary figures and one supplementary table are available with the online Supplementary Material.

© 2016 IUMS | Published by the Microbiology Society

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